Pairwise Alignments

Query, 526 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 518 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (267), Expect = 1e-27
 Identities = 132/513 (25%), Positives = 221/513 (43%), Gaps = 66/513 (12%)

Query: 18  RSLLGASLLAMLCAALPQQQAHAQGPRNFATLAMVAEP-QTLDPMASTADLVGT-IMQHV 75
           +  L AS+  +  A  P    HA  P++   +A V +   TLDP A   ++ G+  M +V
Sbjct: 2   KQFLKASVFTLSIALTPFATVHAATPKDTLVMAWVFDDIVTLDP-AEIYEVSGSEFMANV 60

Query: 76  YETLYTFDAK--WNVVPMLAEGMPKISADGKTYAIALRKGVMLHNGRELNADDVVASLQR 133
           Y+ L T D K    +  ++AE    +S DGKT+   +R      +G  +  +DV  S++R
Sbjct: 61  YDRLVTLDEKDPSKLRNVIAESW-SVSEDGKTFTFKIRPNNTFFSGNPVTGEDVEFSVER 119

Query: 134 W--MDQSPR------GKAVGKEIDSLKAKGPLAVEIVLKEPYAPLLSQLALPSGMAAIMA 185
           +  +D++P       G       D ++   P+ VEI L + YAP    L   S   A++ 
Sbjct: 120 YVLLDKNPAFIMNQFGLTKENVRDKVRLVDPMTVEIELDQAYAPSFF-LNCVSYTTAVVD 178

Query: 186 KDSIASP-----------LKDFVGTGPYKFKERRPDQFVLLTRFDKYSARKEAASGYGGK 234
           K  + S             +++ G+GP+  K  +P++ ++L    KY         + G 
Sbjct: 179 KKEVLSHEENGDFGNGWLKRNYAGSGPFFLKAWKPNESLVLEANPKY---------FDGA 229

Query: 235 REAAIEELRFVPVPNASTRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFP 294
               I+ +    V  ++T+      G  D A  L  + L  + K+   T+   T +  + 
Sbjct: 230 --PTIKRVLAKNVVESATQQLLLEKGDVDVARNLTGDQLAAVRKNADITIDAETKATLW- 286

Query: 295 YLVLNTKEGVAASQPVRQAIQTAL---GEGEMLAAGFGDTR--FFVAEANHFPKGSPFYS 349
           Y+ LN K  + A   VRQA++  +   G  + + AG G     F  +        +PF  
Sbjct: 287 YMGLNVKNPILAKPEVRQAMKYLVDYKGMADSIFAGTGTIHQTFVPSRQLGALDETPF-- 344

Query: 350 TAGADQYNQRNAAKAKEAAAKAGYK-GEPIRVLTSRQYDFHYNMALLMAEQLKRAGFKVD 408
                     + AKAKE  AKAG   G  + + T+ + +   N+A  +   + +AG K++
Sbjct: 345 --------SFDLAKAKELLAKAGLPDGFSVTMDTTNKSETR-NLADAIQSSMSKAGIKIE 395

Query: 409 LNVVDWATLVQRRNDPKLWDVYVTHSGQFPEPMLSPPQLGDG---AP----GWWETPAKK 461
           L V D  T + R    +  D+Y+   GQ+      P    DG   AP      WE P   
Sbjct: 396 LKVADNKTTLTRYRASE-HDIYI---GQWGSDYWDPHSNTDGYLNAPLAKRNQWEVPGLV 451

Query: 462 SALQAFNVESDPAKRGALWGKVQQVVYDEVPYI 494
             + A   E DP KR  ++  +Q +  +E PY+
Sbjct: 452 DKVFAARDEKDPVKRAQMYKDLQSMALEESPYV 484