Pairwise Alignments

Query, 257 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 173 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 1   MLDERYLSQFPALRSRLVRAAARMLGGTADAEDVVQDTYLRALEAADKPAP-DSAQAWLT 59
           +L+E+ +   PALR+     A      + +A+D+VQ+T LRAL + ++  P  S ++WL 
Sbjct: 14  LLEEQVVDLIPALRA----FARTFTSASFEADDLVQETLLRALRSIEQFEPGTSLKSWLF 69

Query: 60  TVMQNLAVDRLR-RDRWMQWWLKDAEGLSPQAPSAETEAAQAQEADHALRLLAERLSRTD 118
           T+M+N    + + R R        AE   P APS E      +     LR     LS   
Sbjct: 70  TIMRNAFRTQYKIRTRESPGSTNCAELPIPTAPSQEWSVLNGE-----LRSALGALSPEH 124

Query: 119 AAAVLLREVFELSYSEIAKVSGKTEAGCRQQLHRA 153
              ++L   F +SY E A +        + +L RA
Sbjct: 125 REVLVLVAGFGMSYKEAADICDCAIGTIKSRLSRA 159