Pairwise Alignments

Query, 575 a.a., Single-stranded-DNA-specific exonuclease RecJ from Variovorax sp. SCN45

Subject, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ from Enterobacter sp. TBS_079

 Score =  446 bits (1147), Expect = e-129
 Identities = 247/559 (44%), Positives = 350/559 (62%), Gaps = 20/559 (3%)

Query: 23  PLLARLFAARGVRAKDELDDGLARLLSPDTLRGTHDAAVLLADAIAQDKRLCIVADYDCD 82
           PLL RL+A+RGVR   +L+  +  +L    L G   A  +L +A+ +  R+ +V D+D D
Sbjct: 24  PLLKRLYASRGVRTAADLERSVKGMLPWQQLNGIEKATEILYNALCEGTRIVVVGDFDAD 83

Query: 83  GATACAVGVRGLRLLGAKNVSYLVPDRVVDGYGLTPPIAERVAASGADMLITVDNGIASV 142
           GAT+ A+ V  LR LG  NV+YLVP+R  DGYGL+P + ++  A GA +++TVDNGI+S 
Sbjct: 84  GATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPEVVDQAHARGAQLILTVDNGISSH 143

Query: 143 EGVAAAKARGLQVLVTDHHLPGPELPLADVLVNPNQPGCEFESKSIAGVGVMFYVLLALR 202
            GV  A   G+ VLVTDHHLPG  LP A+ ++NPN   C+F SKS+AGVGV FY++LALR
Sbjct: 144 AGVDHAHQLGIPVLVTDHHLPGETLPAAEAIINPNLRDCDFPSKSLAGVGVAFYLMLALR 203

Query: 203 SELRKRGVFD--TATQPKLDALLPLVALGTVADVVKLDANNRRLVAQGLRRIRAGAMPAG 260
           + LR +G FD      P L   L LVALGTVADVV LD NNR L  QGL RIRAG    G
Sbjct: 204 TLLRDKGWFDARVIAVPNLAEYLDLVALGTVADVVPLDTNNRILTWQGLSRIRAGKCRPG 263

Query: 261 VAALFKAASRHASAATTFDFGFALGPRINAAGRLADMTLGIECLLTDDAGRAEELARMLD 320
           + AL + A+R        D GFALGPR+NAAGRL DM++G+  LL D+ G A  LA  LD
Sbjct: 264 IKALLEIANRDPLKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELD 323

Query: 321 GINRERRDIEGGMRDQALLLAESLFSNGTDGEGIAAPPPAISVFDAGFHEGVVGIVASRI 380
            +N+ R++IE GM+ +AL L E L  +G         P  ++++   +H+GVVGI+ASRI
Sbjct: 324 ALNQTRKEIEQGMQVEALTLCEKLERSGD------TLPGGLAMYHPEWHQGVVGILASRI 377

Query: 381 KDRFHRPTFVFAASGAPGKEQELKGSGRSIPGFHLRDALDLVAKRHPGVLLRFGGHAMAA 440
           K+RFHRP   FA +G    +  LKGSGRSI G H+RDAL+ +   +PG++L+FGGHAMAA
Sbjct: 378 KERFHRPVIAFAPAG----DGTLKGSGRSIQGLHMRDALERLDTLYPGLMLKFGGHAMAA 433

Query: 441 GCTVAREHFETFEKGFAQVARELLADAALTRQIETDGPIAREYMRIDLVDTLH-REVWGQ 499
           G ++    F+ F++ F ++  + +  A L  ++ +DG +    M +++   L     WGQ
Sbjct: 434 GLSLEEAKFDEFQRLFGELVTDWIDPALLQGEVVSDGELTPVEMTMEVAQMLRDAGPWGQ 493

Query: 500 GFAPPTFSEEVEVVSQRLVGEKHLSLKLR--HQGQPIDAMWFSHTEPLPP-----RVKLA 552
            F  P F     ++ QR+VGE+HL + +     G  +D + F+    + P      V+LA
Sbjct: 494 MFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTAVWPDNGVREVELA 553

Query: 553 FRLDADEWQGVRRLRFLVE 571
           ++LD +E++G R L+ +++
Sbjct: 554 YKLDINEFRGNRTLQIIID 572