Pairwise Alignments

Query, 388 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 5/168 (2%)

Query: 208 QEAHTHALMGAMGTDALTGATSRAGFESRGDEWLREGRPFSLMLVGLNGFSRVNERHGRA 267
           +EA  H ++    TD LTG  +R    +  +   R G  FSL L+ LNGF ++N+ +G  
Sbjct: 202 KEATHHRVLAL--TDPLTGLENRTAMFAELERHRRSGG-FSLFLLDLNGFKQINDTYGHQ 258

Query: 268 GGDAVLAAIAQRLRQQVRA-DDMVARLGDDEFALLLVGSPTRQKLAEMAIRIETAGATPV 326
            GDAVL  +A RL   + + D  V R+G DEFA++L    + +++  M   I+       
Sbjct: 259 MGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQMM-MQRMIKQCFDHEF 317

Query: 327 TYEGRLLAGGELSMGIACHPADGDTLASLMASAAEALRHCKQQRMGPA 374
              G L A    S+G++ +P D   L+ L+  A + +   K  +  P+
Sbjct: 318 ELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMKFLQKSPS 365