Pairwise Alignments

Query, 320 a.a., LSU ribosomal maturation GTPase RbgA (B. subtilis YlqF) from Variovorax sp. SCN45

Subject, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (680), Expect = 5e-76
 Identities = 136/310 (43%), Positives = 199/310 (64%), Gaps = 6/310 (1%)

Query: 2   AIQWFPGHMYATQKAITERVKDIDVVIELLDARLPGSSANPMLAELTARRPSLKVLNKQD 61
           +IQWFPGHM+  +K I E +  +DV+IE+LDAR+P SS NP+++ +   +P +KVLNK+D
Sbjct: 5   SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRD 64

Query: 62  LADPERTVRWLAHYNALPDTRAIGLDASQTTPAQQLVKACHELSPNRGGMAKPMRVLICG 121
           LADPE T  W+AH       +A+ +  S      ++++ C +L+P R  + K +R +I G
Sbjct: 65  LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEIGKNIRTMIMG 124

Query: 122 IPNVGKSTLINTLTGGRKAKTGDEAGITKLEQRITLADDFYLWDTPGMLWPRIIVPKSGY 181
           IPNVGKST+INTL G   A+TG++  +T+ +QRI L +   L DTPG+LWP++  P SG+
Sbjct: 125 IPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKVENPHSGF 184

Query: 182 NLAASGAVGRNAFDEEEVALELLNYLKVHYGAGVAARFKLVELDAPTMAEMKDEALLDTI 241
            LAA+GAV   A + +EVA   + YL  HY   +  R+++ EL         D  L++ I
Sbjct: 185 RLAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPE------TDVELMEEI 238

Query: 242 GRKRGALLGKGRVNLQKAAEIVMHEFRAGNLGRITLETPEEFAGWLAAGQLADAERAAKK 301
           GRKRGAL    RV+L KA+EI++HE R G LG+ITLE PE     L   ++ +A +A +K
Sbjct: 239 GRKRGALRAGARVDLHKASEILLHELRQGVLGQITLERPEMITEELQQVEIDEALKAEEK 298

Query: 302 AARKQKGKPR 311
           A RK++ + R
Sbjct: 299 AKRKEERRKR 308