Pairwise Alignments

Query, 320 a.a., LSU ribosomal maturation GTPase RbgA (B. subtilis YlqF) from Variovorax sp. SCN45

Subject, 384 a.a., 50S ribosome-binding GTPase from Methanococcus maripaludis JJ

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 35/283 (12%)

Query: 14  QKAITERVKDIDVVIELLDARLPGSSANPMLAELTARRPS--LKVLNKQDLADPERTVRW 71
           ++ + + + + ++V+ ++DAR P ++ N  L E T  +    + V+NK DL   +   +W
Sbjct: 21  RRMVHKIIYECNIVLLVVDARDPETTRNRALEEYTIEKNKKLIYVINKSDLVPKKILEKW 80

Query: 72  LAHYNAL-PDTRAIGLDASQTTPAQQLVKACHELSPNRGGMAKPMRVLICGIPNVGKSTL 130
              + +  PD+  + + A +    + L         +     K  +V I G PNVGKS++
Sbjct: 81  KNKFKSENPDSSVVFVSAKEKLGTKMLRDEIKTYLNSNS--IKYGQVGIVGYPNVGKSSI 138

Query: 131 INTLTGGRKAKTGDEAGITKLEQRITLADDFYLWDTPGMLWPRIIVPKSGYNLAASGAVG 190
           IN LTG + A++G  AG+T  EQ + L  D  L D+PG     II PK    L  SGA+ 
Sbjct: 139 INALTGKKSARSGLTAGLTVGEQWVKLTKDIKLLDSPG-----IIEPKDEDELVISGALR 193

Query: 191 -RNAFDEEEVALELLN--------YLKVHYGAGVAARFKLVELDAPTMAEMKDEALLDTI 241
              A D    AL++L+         LK +YG  +     +               LL+ I
Sbjct: 194 YEKADDVISPALKILSRIHTFDNTILKEYYGFEIGEEINI--------------ELLEKI 239

Query: 242 GRKRGALLGKGRVNLQKAAEIVMHEFRAGNLG--RITLETPEE 282
           G K   L   G++++ + ++ ++ EF+ G L   R+ L+  E+
Sbjct: 240 GTKLNFLTKDGKIDIDRTSKSIIREFQNGKLNYHRMNLKKYEQ 282