Pairwise Alignments

Query, 306 a.a., Membrane proteins related to metalloendopeptidases from Variovorax sp. SCN45

Subject, 311 a.a., peptidase, M23/M37 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  116 bits (290), Expect = 8e-31
 Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 101 GIPLSAEPGEAGITVRPEGRPEKQIAYIVAPKQYREQRLT-VAPRTVDLSPEDQARYERE 159
           G    AE  +    V P+G  E +   I A ++Y  Q +  ++ + +   P  Q R  ++
Sbjct: 91  GFDRDAELTQQLTLVYPDGLTEVKPLNI-AKREYNIQSVKGISNKIMKPDPVAQERAAKD 149

Query: 160 RAHLTTVMATLTDMGPDAALQMRV-PVPGRRSSSFGLRRVFNGQSRNPHSGMDIAAGTGT 218
            A +     T ++    A LQ  + P+ GR S  +G +R++N    NPH G+D+AA TGT
Sbjct: 150 TAQVKAARGTFSEQ--TAFLQPFIWPLTGRISGVYGSQRIYNDVPGNPHFGVDVAAKTGT 207

Query: 219 PVLAPLPGKV-IDTGDYFFNGGTVWLDHGGGLLTMYCHLSRVDVKVGDVLKTGEKLAAVG 277
            V+AP  G + +   D F++GGT+ +DHG G+ + + HLS++ V  G+ +K G+ +A VG
Sbjct: 208 VVVAPADGVISLSVPDMFYSGGTMVIDHGYGVSSSFLHLSKLYVNAGETVKQGQAVAEVG 267

Query: 278 ATGRVTGPHLHWSVMLNRAMVDPALFI 304
           ATGR  GPHL W V   +  +DP   +
Sbjct: 268 ATGRANGPHLDWRVNWFQMRLDPTSIV 294