Pairwise Alignments

Query, 183 a.a., LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) from Variovorax sp. SCN45

Subject, 232 a.a., ribosomal large subunit pseudouridine synthase E from Phaeobacter inhibens DSM 17395

 Score =  234 bits (596), Expect = 1e-66
 Identities = 118/178 (66%), Positives = 137/178 (76%), Gaps = 4/178 (2%)

Query: 8   SRLIRFNKPYGVLSQFTPEGRWRG----LKDFIDIPGVYVAGRLDADSEGLLLLTDDGKL 63
           +RLIRFNKPY VL QFT  G        L D+ID+PGVY AGRLD DSEGL+LLTD G+L
Sbjct: 2   TRLIRFNKPYDVLPQFTDRGSDSSPRATLSDWIDLPGVYPAGRLDRDSEGLMLLTDHGRL 61

Query: 64  QARIADPRFKMEKIYWVQVEGTPTEEALAALRAGVQLNDGPTRPARARLLDPPPQVWERQ 123
           QA I+DP+ KM K YWVQVEGTP   A+ AL  GV+L DG TRPA+A L++ P  +W R 
Sbjct: 62  QAWISDPQHKMPKTYWVQVEGTPDAAAIQALANGVELKDGMTRPAKAALIEEPEGIWARN 121

Query: 124 PPIRERKSIPTAWLELAIREGRNRQVRRMTAAVGLPTLRLIRAAIGPHTLEGLAPGSW 181
           PPIR RKS+P +W+ L IREGRNRQVRRMTAAVG PTLRLIRAAIG  TL+GL+PG+W
Sbjct: 122 PPIRVRKSVPDSWIALTIREGRNRQVRRMTAAVGHPTLRLIRAAIGIWTLDGLSPGTW 179