Pairwise Alignments

Query, 604 a.a., Glutaminyl-tRNA synthetase (EC 6.1.1.18) from Variovorax sp. SCN45

Subject, 555 a.a., glutamate--tRNA ligase from Methanococcus maripaludis S2

 Score =  150 bits (378), Expect = 2e-40
 Identities = 115/388 (29%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 58  VRMRFPPEPNGYLHIGHAKSIWLNFELAKEYGGVCHLRFDDTNPEKEDQEYVDSIRDAVK 117
           V MRF P P+G LHIGHA++  LN   +K+Y G   LR +DT+ ++   E  + I++ +K
Sbjct: 94  VVMRFAPNPSGPLHIGHARASVLNDFFSKKYNGKLVLRLEDTDAKRVLPEAYEMIQEDLK 153

Query: 118 WLGYETYLADRPSAPGTLQEHEYFASNYFDFMYEAAEYLIGAGLAYVDEQTADEVRANRG 177
           WLG +              +     S   +  YE    LI  G AYV +  ADE R  R 
Sbjct: 154 WLGVKV-------------DEVIVQSERLETYYEYGRKLIEMGHAYVCDCDADEFRTLR- 199

Query: 178 DFNTPGTDSPFRTRTPEENLARFRAMRDGQVADGAAILRAKIDMASTNINMRDPALYRVR 237
                G     R  TPEEN+A +  M  G++ D  A+ R K D+A  N ++RD  ++R+ 
Sbjct: 200 ---EQGLPCKCRDTTPEENIALWEKMLAGEL-DNVAV-RLKTDIAHKNPSIRDFPIFRIE 254

Query: 238 RAHHHNTGDKWCIYPMYTYAHPIEDALEQITHSI----CTLEFEDQRPFYDWLLDRLAEG 293
           R  H   G K+ +YP+   +  ++D L  +TH +      +  E Q   Y++    +   
Sbjct: 255 RTPHPKNGTKYHVYPLMNLSVTVDDHLLGMTHVLRGKDHIVNTEKQEYIYNYFGWEI--- 311

Query: 294 GLVASPHPRQYEFARLNVTHVMTSKRKLRQLVEEKYVDGWDDPRMPTIAGLRRRGYTPEA 353
                  P    +  L +   + S  K+   +      GWDD R+ T+  LR+RG  PEA
Sbjct: 312 -------PEYVHYGILKIEGPVLSTSKMHAGILSGEYSGWDDARLGTLRALRKRGIRPEA 364

Query: 354 LRLFCERSGTTKSGGWIAYAGLEAALRETMDPVAPRAMAVLDPVKLVITNWGELMGGDDS 413
           L       G  ++    A+  L AA ++ +D  A R   V  P KLVI+      G ++ 
Sbjct: 365 LYKLMVEIGIKQADVRFAWENLYAANKDIIDKDARRFFFVESPKKLVIS------GAENR 418

Query: 414 LDDCSAPVHPHHPDMGKREFKLGREVWI 441
             D    +HP   ++G RE     E+++
Sbjct: 419 KIDLR--MHPDRSELGNRELLFDGEIYV 444