Pairwise Alignments

Query, 337 a.a., Autolysin sensor kinase (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 359 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  161 bits (408), Expect = 2e-44
 Identities = 111/337 (32%), Positives = 169/337 (50%), Gaps = 25/337 (7%)

Query: 8   TAVFNCLIATLLSITSGGNWVAHMVYSMSIGIVAWLFID-IGRLLLSGHRESLWPEWPRG 66
           T +F  +IA       GG +  H+  S S G  A+     I R          WPE  + 
Sbjct: 18  TTLFCIVIALATMSIWGGLFGEHLAISFSYGYSAFFSAQWIARR---------WPELSKR 68

Query: 67  MLLIAAGVAVGFFVGNLIGDAWVGA-PTFDFLDLKGHKLATGITITIIAAIGMSFFFYSL 125
           ++ I + ++    +G      W+   P FD        +  G   + +  +    +FYS 
Sbjct: 69  LVNILS-LSCAVVLGTSSAYLWLRHYPGFDEFSAYKPIIFLGFIFSAVCFL----YFYSH 123

Query: 126 GKSKHMQSQIEVAQRNATE-------ARLKLLETQLEPHMLFNTLANLRVLITVDPPRAV 178
            +    Q  +E A+R  +E       ++LK L++Q+EPH LFNTLAN+  LI V+P +A 
Sbjct: 124 EQKILAQGALEAARRRQSEQEKALLLSQLKQLQSQMEPHFLFNTLANINALIAVEPYKAQ 183

Query: 179 AMLDRLNSYLRMTLSGSRALSHPLSAEFERLADYLELMSVRMGDRLHYTLELPESLRDAP 238
            ML++L   LR T+   R  +  L  E + +  YL +  +R+G+RL YTL     L    
Sbjct: 184 LMLEKLTELLRGTMRLRRTNTGDLREEMQLIDAYLGIQKIRLGERLEYTLPELSELGTLG 243

Query: 239 VPPLLLQPLVENSIRHGLEPKVEGGEITVRAREDAGQLVIEVSDTGVGLDAAPPSEGSSF 298
           +PP+L+QPLVEN++ HG+EPK EGG I VR         + V D G+GL   P  +G+  
Sbjct: 244 MPPMLIQPLVENAVSHGIEPKAEGGTIRVRIEVADDWFELSVEDNGMGLSDTP--KGNGI 301

Query: 299 GLEQVRERLATVYGAQGALRLAPTGAGGTCATLNFPL 335
            L+ VR+RL+ ++G +G L +A   +GG  ATL   L
Sbjct: 302 ALQNVRDRLSGLFGHEGLLTVAQNCSGGVTATLRIRL 338