Pairwise Alignments

Query, 579 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 792 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 65.9 bits (159), Expect = 6e-15
 Identities = 73/248 (29%), Positives = 112/248 (45%), Gaps = 38/248 (15%)

Query: 356 IEEVNAAK---ADLAATLAQQHALE--LTHARIGERMNLVSDLHDGLGGMLVGSIAKLER 410
           I +V+A K   A+L  +  Q  AL   L   R  ER  +  ++HD LG  L  ++ KLE 
Sbjct: 549 IHDVSARKQADAELMRSRDQLRALNEGLQRVREEERSRISLEIHDQLGQSL--TVLKLEM 606

Query: 411 TPEDLSAPELLAMLKHLRDDLRLIIDATGR--DDGARALGELLAPMRYRSAQLLDANGID 468
                    L A L   + + +  +   GR  DD  RA+  +   +R     +LD  G+ 
Sbjct: 607 A-------WLRARLLGGQAEEKTRLQEVGRLIDDTLRAVRTISWDLR---PGILDTLGLG 656

Query: 469 C--RWSVSNI--------------ETLELPASQSLDLMRFLQEALTNVLKHSASRRVDVT 512
               W V +               E LELP   +  L R  QE LTNV +H+ + R+DV+
Sbjct: 657 AGVEWLVDDFRRRLGIRCNVVVPRERLELPDVLATHLFRICQELLTNVARHAQANRIDVS 716

Query: 513 VARAGAELRLSVRDDGRGFVVENIDKATGAGLRSLRARARRLGAQLQLQSRP--GETQVL 570
           +  A   + L VRD+GRG  +         GL  ++ RA + G ++ + +RP    T+V 
Sbjct: 717 LGLADGRVLLEVRDNGRGMPMLPA-HGHSLGLLGIKERAAQCGGEVHIATRPEIEGTRVR 775

Query: 571 LRMPLGAR 578
           + +PL  R
Sbjct: 776 VLVPLITR 783