Pairwise Alignments

Query, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 312 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  217 bits (552), Expect = 3e-61
 Identities = 120/309 (38%), Positives = 181/309 (58%), Gaps = 3/309 (0%)

Query: 4   FLGKRLLATLPVLLVVAVAIFMIVRLTPGDPAAVIGGNSATNEDLDRIRVQLGLTRPLWE 63
           F+  R L  LPV+  +++  F++VRL PGDPA  + G  AT   + +IR Q GL  P+W+
Sbjct: 6   FVLTRPLQFLPVIFGISIITFILVRLIPGDPARNLLGARATPSAIAKIRAQYGLDEPMWQ 65

Query: 64  QFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLGTLAAWR 123
           Q+  +   +  G++G S      V +LI  R+EPT++L   +++LAV IA+P+  LAA  
Sbjct: 66  QYFYFLKNLADGEMGKSILYKIDVLKLIATRVEPTIALVLSSVVLAVLIAVPMAALAARN 125

Query: 124 MGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPWLHQLVL 183
            G   D  V   S  G   P F +G +L+ L ++KL   PV GY       G  L  L+L
Sbjct: 126 SGKAPDHIVRVVSTFGIGFPPFWLGLMLMILFSVKLDVLPVSGYGAT---FGDKLAHLIL 182

Query: 184 PCLTLAITYVALLSRVTRAAVSEALTEDFIRTARAKGITELEVLKHHALRNAAVPVVTVI 243
           P LT+A++   +L R  RAA+ E+L  D    ARA+G+ E  V   H + N+ VP + ++
Sbjct: 183 PSLTVALSLSTVLVRSLRAAMIESLKSDVATAARARGMPERIVFWRHVVPNSLVPTINLL 242

Query: 244 GVSAALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVNLLVDLS 303
            V+   L+GG VV E+VFA+PG+GQL V A+ +RD+ V+QGV + FA   V VN + D+ 
Sbjct: 243 AVNIGWLIGGTVVVESVFALPGMGQLLVRAIFSRDYMVVQGVAMVFACATVLVNFIADIV 302

Query: 304 YLFIDPRIR 312
            + +DPR++
Sbjct: 303 TVAVDPRVK 311