Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  171 bits (434), Expect = 1e-47
 Identities = 102/285 (35%), Positives = 160/285 (56%), Gaps = 15/285 (5%)

Query: 4   LKRLWRNTAVRGGVVVLAVLALLGAFAPWLGTFDPSAMDPSFISVGAGTAGQVTMPDGAQ 63
           L + +R+     G V+L ++     FAPWL  +DP A D             + M     
Sbjct: 23  LGKSFRHRGFAIGAVLLLIIFAGALFAPWLAPYDPYAQDV-----------MLRMKPPVW 71

Query: 64  FAHTFW---MGSDSVGRDVWSRVLYGTRISMTVGLFTAFVAIAFGCLLGMLAGYFRA-VD 119
            A+  W   +G+D +GRD  SR+LYG RIS+ +G+  A ++   G ++G+LAGY+   VD
Sbjct: 72  MANGTWEYVLGTDKLGRDYLSRLLYGARISLFIGIAAALISGFIGTVMGLLAGYYGGKVD 131

Query: 120 AVLMRVMDGVMAIPAVLLAITLVAVLGASLPTVILAIAVPEVPRVTRLVRALVMSLRDEP 179
           A +  ++   +A+P V++A+   +++G SL  VI+ +      R   +VRA V  +RD  
Sbjct: 132 AFISYLITTRLAMPVVMVALASASLMGGSLKVVIVLLGCLLWDRFAVVVRASVQQIRDAE 191

Query: 180 FVEAARALATADATILWRDILPNALAPLIVQGTFIAASAVLTEAILSFLGLGLPSDVPTW 239
           +V +A+AL  +   IL  +ILPN +  LIV  T   A A+L E+ LSFLG+G+    P+W
Sbjct: 192 YVASAQALGCSTLRILVSEILPNLVGALIVVATLEMAHAILLESALSFLGVGVQPPTPSW 251

Query: 240 GNIMAEGRVQFSQSPGNVLFPALFLVPTVLAINMLGDGLRDVLDP 284
           G ++AEG+     SP  +  P + L+  VL IN++GDGLRD++ P
Sbjct: 252 GLMIAEGKPYMFFSPWVIAIPGVALMILVLGINLVGDGLRDLILP 296