Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

 Score =  170 bits (430), Expect = 4e-47
 Identities = 99/281 (35%), Positives = 150/281 (53%), Gaps = 15/281 (5%)

Query: 6   RLWRNTAVRGGVVVLAVLALLGAFAPWLGTFDPSAMDPSFISVGAGTAGQVTMPDGAQFA 65
           R  RN A    + VL ++ L   F P    +  S  D  + ++ AG + +          
Sbjct: 32  RFMRNKAAMVSLFVLMLITLAVVFLPMFSAY--SYEDTDWYAMHAGPSAE---------- 79

Query: 66  HTFWMGSDSVGRDVWSRVLYGTRISMTVGLFTAFVAIAFGCLLGMLAGYFRA-VDAVLMR 124
              W G+D++GRD++ R L G RIS+ VG+  A VA+  G L G  +G+     D V+MR
Sbjct: 80  --HWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMR 137

Query: 125 VMDGVMAIPAVLLAITLVAVLGASLPTVILAIAVPEVPRVTRLVRALVMSLRDEPFVEAA 184
           +++ + AIP + L I LV   G ++  + +AI       + R+VR   +SLR + F+EAA
Sbjct: 138 ILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAA 197

Query: 185 RALATADATILWRDILPNALAPLIVQGTFIAASAVLTEAILSFLGLGLPSDVPTWGNIMA 244
                +   I+ R I+PN L  + V  T +  S +LTE+ LSFLGLG+   + +WG ++ 
Sbjct: 198 HVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQ 257

Query: 245 EGRVQFSQSPGNVLFPALFLVPTVLAINMLGDGLRDVLDPK 285
           EG      +   +LFPA F+V T+   N +GDGLRD LDPK
Sbjct: 258 EGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298