Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  188 bits (478), Expect = 1e-52
 Identities = 108/285 (37%), Positives = 160/285 (56%), Gaps = 16/285 (5%)

Query: 6   RLWRNTAVRGGVVVLAVLALLGAFAPWLGTFDPSAMDPSFISVGAGTAGQVTMPDGAQFA 65
           RL  N  +  G+  L +LA  G  APW+  FDP         + A        PD     
Sbjct: 2   RLGFNFWLGAGLTTLVILA--GILAPWIAPFDPV--------LDADLMNSELPPDA---- 47

Query: 66  HTFWMGSDSVGRDVWSRVLYGTRISMTVGLFTAFVAIAFGCLLGMLAGYFRAVDAVLMRV 125
            TFW G+D  GRDV++R+LYG +IS+TVG+ +  +    G  LGM AGY+      L+  
Sbjct: 48  -TFWFGTDGQGRDVYTRILYGAQISLTVGIVSQVINSIIGVTLGMTAGYWGGWWDDLVNG 106

Query: 126 MDGVM-AIPAVLLAITLVAVLGASLPTVILAIAVPEVPRVTRLVRALVMSLRDEPFVEAA 184
              VM AIP+++ A+ ++AVLG  LP++++A+ +       R+ R+  +SL+   +V+AA
Sbjct: 107 FTNVMLAIPSLIFALAVMAVLGPGLPSLLIALGLTNWSWTCRIARSSTLSLKSLGYVQAA 166

Query: 185 RALATADATILWRDILPNALAPLIVQGTFIAASAVLTEAILSFLGLGLPSDVPTWGNIMA 244
           + L   D  I++  ILPN + P++V  T    SAVL+EA LSFLGLG+    P+WG+++ 
Sbjct: 167 QTLGYGDLRIMFTQILPNMMGPILVMATLGMGSAVLSEAALSFLGLGIQPPFPSWGSMLT 226

Query: 245 EGRVQFSQSPGNVLFPALFLVPTVLAINMLGDGLRDVLDPKFSKR 289
           + R     +P   +FP L +  +VL  N+LGDGLRD LDP    R
Sbjct: 227 DARQLIQLAPWVAIFPGLAIFLSVLGFNLLGDGLRDSLDPHMRTR 271