Pairwise Alignments

Query, 545 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  408 bits (1048), Expect = e-118
 Identities = 237/541 (43%), Positives = 329/541 (60%), Gaps = 23/541 (4%)

Query: 10  ILEVRGLRVALPSDADRPHAIAQLDLRIEAGRTLCIVGESGSGKSVLATTVMGLL----- 64
           IL +  L V   S+ D   A+  +   +  G TL I+GESGSGKSV   TVMGL+     
Sbjct: 8   ILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPG 67

Query: 65  ---SKGLVLEGGDVILSGEKLVDNGRFTSDKRLRQLRGTGMGMVFQEPMTALNPVLTCGE 121
              S  LV +G D+     +L D GR       R+L G  + M+FQ+P+  LNPV T G 
Sbjct: 68  DIVSGSLVFDGTDL----SRLDDEGR-------RELNGRRIAMIFQDPLAYLNPVYTVGR 116

Query: 122 QVDELLRTHTAWGAAERKAHILSIFERVRLPDPARIHASYPHQLSGGQRQRIVIAMAIIL 181
           Q+ E+  +H        +  ++ + ERV +P+       YPHQ SGGQRQR++IAMAI L
Sbjct: 117 QIAEVFESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIAL 176

Query: 182 KPRLLICDEPTTALDVTTQAEILKLIAELQAEQGSAVLFITHDMGVVAEIADDVMVMHRG 241
           KP +LI DEPTTALDV+ QA+IL+L+ +LQ E G A++ ITHD+ V A +AD ++VM+ G
Sbjct: 177 KPDILIADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGG 236

Query: 242 ALVEQGPCDQVLRSPREAYTRMLLDAVPGMTPPPA-RELPGGRPLLAGQGVGKIYTRRDW 300
            +VE G  + V  +P  AYTR L+ AVP    P A R    G  LL    + K Y     
Sbjct: 237 KVVESGKAEDVFTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSG 296

Query: 301 LGRAKHN-TALQDASVAVHRGETVGVVGESGSGKSTFARCMIRLISPSAGSILWGDAEVR 359
               K    A+ D S  + RGETVG+VGESGSGKS+ AR ++RL  P++G+ L+   ++ 
Sbjct: 297 PFSPKREFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIF 356

Query: 360 DLPEGRLRPLRSRVQVVFQDPNRSLNPRRTVGSSMVE--GAMNFGLSKLHARQTAEELMD 417
           +L    L   R RVQ+VFQDP  S+NPR  V S + E        L +    +   EL++
Sbjct: 357 ELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLE 416

Query: 418 RIQLPRTALDRYPHQFSGGQRQRLAIARAIACQPQVLVADEAVSALDVSVQAQILDLLRE 477
            + L      R+PHQFSGGQRQR+AIARA+A +P+++V DEAVSALDVS+Q Q+++LL +
Sbjct: 417 LVGLKAEHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLAD 476

Query: 478 IQRDLGLGILFITHDLRVAAQLCDRVIVMSQGRIVEQGPTGQVFAAPANDYTRRLLAAAP 537
           +++ LGL  +FITHDL +  Q  DR++VM +GRIVE+G T  +F +P ++YT+ LL A P
Sbjct: 477 LRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRAVP 536

Query: 538 R 538
           +
Sbjct: 537 Q 537



 Score =  193 bits (491), Expect = 1e-53
 Identities = 114/255 (44%), Positives = 156/255 (61%), Gaps = 9/255 (3%)

Query: 299 DWLGRAKHNTALQDASVAVHRGETVGVVGESGSGKSTFARCMIRLISPSAGSILWGDA-- 356
           D+L       A+ D S  V  GET+ ++GESGSGKS     ++ LI    G I+ G    
Sbjct: 17  DFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPPGDIVSGSLVF 76

Query: 357 EVRDLP----EGRLRPLRSRVQVVFQDPNRSLNPRRTVGSSMVEGAMNFGLSKLHA-RQT 411
           +  DL     EGR      R+ ++FQDP   LNP  TVG  + E   + G  +  A R  
Sbjct: 77  DGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHGEGEGGAVRDK 136

Query: 412 AEELMDRIQLPRT--ALDRYPHQFSGGQRQRLAIARAIACQPQVLVADEAVSALDVSVQA 469
              L++R+ +P     +D YPHQFSGGQRQR+ IA AIA +P +L+ADE  +ALDVSVQA
Sbjct: 137 VVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEPTTALDVSVQA 196

Query: 470 QILDLLREIQRDLGLGILFITHDLRVAAQLCDRVIVMSQGRIVEQGPTGQVFAAPANDYT 529
           QIL+LLR++QR+ G+ ++ ITHDL VAA + DR+IVM+ G++VE G    VF  P++ YT
Sbjct: 197 QILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAEDVFTNPSHAYT 256

Query: 530 RRLLAAAPRAELASA 544
           RRL++A P A+   A
Sbjct: 257 RRLMSAVPHADAPKA 271