Pairwise Alignments

Query, 669 a.a., Coupling protein VirD4, ATPase required for T-DNA transfer from Variovorax sp. SCN45

Subject, 639 a.a., conjugal transfer protein TraG from Sinorhizobium meliloti 1021

 Score = 91.3 bits (225), Expect = 1e-22
 Identities = 109/422 (25%), Positives = 184/422 (43%), Gaps = 40/422 (9%)

Query: 146 HVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWSITAGWRSRF--SHCLLFNPTD 203
           H+L FA +   K    VVPT L +    +  D   E   +    R+R      ++ +PT+
Sbjct: 222 HMLFFAGSGGYKTTSNVVPTALRYTGPLICLDPSTEVAPMVVEHRTRVLGREVMVLDPTN 281

Query: 204 AKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALERR--NHWEKTSHALLVGAILHVL 261
                +N L  +     +  D+  IA +L+      E    ++++  +H LL G + HV+
Sbjct: 282 P-IMGFNVLDGIEHSRQKEEDIVGIAHMLLSESVRFESSTGSYFQNQAHNLLTGLLAHVM 340

Query: 262 ----YAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLVSEEGGGPHPVVASAAREVL- 316
               YAG  +TLR +   +S+P  P  L + R       + E         ++  RE L 
Sbjct: 341 LSPEYAGR-RTLRSLRQIVSEPE-PSVLAMLRD------IQERSA------STFIRETLG 386

Query: 317 ---NKSENERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLISAQVPVSLYLVVPPSD 373
              N +E   SGV STA          + A +     ++ +D++S +  V L +   P+ 
Sbjct: 387 VFTNMTEQTFSGVYSTASKDTQWLSLDSYAALVCGNAFKSSDIVSGKKDVFLNI---PAS 443

Query: 374 ISRTKPLI-RLILNQVGRRLTESLDGSDGIARRHKLLLMLDEFPALGRLDFFETALAFMA 432
           I R+ P I R+I+      L  ++  +DG  +R + L MLDE   LG +   E A     
Sbjct: 444 ILRSYPGIGRVIIGS----LINAMIQADGSFKR-RALFMLDEVDLLGYMRLLEEARDRGR 498

Query: 433 GYGIRSFLIAQSLNQIDKAYGQNHSI--LDNCHVRVTFATNDERTAKRISETLGTAT-EL 489
            YGI   L+ QSL Q+++ +G++ ++  +D C      A     TA+ IS   G  T E+
Sbjct: 499 KYGISMMLLYQSLGQLERHFGRDGAVSWIDGCAFASYAAVKALDTARNISAQCGEMTVEV 558

Query: 490 RAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQ-LPPDEAVVMVSSVAPIKAKKLR 548
           +      G            +     RPL+ P E+ Q +  DE +++V   +PI+  +  
Sbjct: 559 KGSSRNIGWDTKNSASRKSENVNYQRRPLIMPHEITQSMRKDEQIIIVQGHSPIRCGRAI 618

Query: 549 YY 550
           Y+
Sbjct: 619 YF 620