Pairwise Alignments

Query, 345 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

Subject, 569 a.a., FHA domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  161 bits (408), Expect = 3e-44
 Identities = 103/330 (31%), Positives = 176/330 (53%), Gaps = 21/330 (6%)

Query: 4   VPSSFTATSLDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWIDRLSTGRAPMGVE 63
           +P     ++L + +      +GPL    + DPDV EIM+N    ++ ++   G   +  +
Sbjct: 195 LPDDIEISALTKEVLDETIGLGPL-EGLIADPDVTEIMVNSHDQIFYEK--AGNLYLS-D 250

Query: 64  LPEADGERI---IRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAA-PGPAFALRK 119
           +  +D + +   I  +   +G  +    P++ A L + G R   ++PP A  GP   +RK
Sbjct: 251 IAFSDDQAVLGAIERIVTPIGRRIDESSPMVDARLKD-GSRVNAVIPPLALKGPCITIRK 309

Query: 120 RALGLIPLARYVSDEMMSGALAGFLVRAVRERQNILIAGGTSTGKTTLANALLAEIAATG 179
                +     V+   MS A+A FL  AV++++N++I+GGT +GKTTL N +L+      
Sbjct: 310 FMQRRLSCNDLVAFGSMSQAMAEFLEIAVKQKRNVVISGGTGSGKTTLLN-VLSNFIPDN 368

Query: 180 DRVLVLEDTVELQCVARDHVPLRTR------QGVVSMQELVRSSMRLRPDRVVVGEVRGA 233
           +R++ +ED  ELQ    + V L  R      +G + +++LV++ +R+RPDRVV+GE RG 
Sbjct: 369 ERIVTVEDAAELQLYQPNLVSLEARPPNQEGKGAIEIRDLVKNCLRMRPDRVVIGECRGG 428

Query: 234 EALDLIKVWGTGHPGGIATIHAGSPLGALLRLEQLILEVAVNPP----RALIAEAVNVVV 289
           EALD+++   TGH G + T H+ SP   + RLE +++   ++ P    R  I  AVN++V
Sbjct: 429 EALDMLQAMNTGHDGSLTTAHSNSPRDCISRLEVMVMMAGMDLPVTAIREQITSAVNIIV 488

Query: 290 HIAG-RGRKRRIESIARVVGFDGAGYHLAD 318
             +      RR+ SI  V G +G    L++
Sbjct: 489 QQSRFCDGSRRVTSICEVTGIEGTVVQLSE 518