Pairwise Alignments

Query, 345 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

Subject, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 16/210 (7%)

Query: 66  EADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPP--AAPGPAFALRKRALG 123
           E D    ++ +   +G  V    P++   LP+ G R   +     +  GP+F +RK    
Sbjct: 207 EGDISNYLKNMCERIGRPVSDATPIVDGSLPD-GSRINILYSGDVSLKGPSFTIRKFTDV 265

Query: 124 LIPLARYVSDEMMSGALAGFLVRAVRERQNILIAGGTSTGKTTLANALLAEIAATGDRVL 183
            I + + +S   MS   A +L   +    +I I G T++GKTT  NA+L  I     ++ 
Sbjct: 266 PISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTSLNAILPFIKPK-SKIF 324

Query: 184 VLEDTVEL--------QCVARDHVPLRTRQGVVSMQELVRSSMRLRPDRVVVGEVRGAEA 235
             EDT E+        Q + R+  P  +R   V++ +L+R+++R RP+ ++VGE+R  E 
Sbjct: 325 SCEDTSEVKPPNPVWQQLLTRERGPEESR---VTLFDLLRAALRSRPNYIIVGEIRSVEG 381

Query: 236 LDLIKVWGTGHPGGIATIHAGSPLGALLRL 265
               +   TGHP  I+T HA +    + RL
Sbjct: 382 AVAFQAMQTGHP-VISTFHAANVRKMIQRL 410