Pairwise Alignments

Query, 824 a.a., Conjugative transfer protein TrbE from Variovorax sp. SCN45

Subject, 792 a.a., VirB4 type IV secretion protein from Sinorhizobium meliloti 1021

 Score =  182 bits (463), Expect = 5e-50
 Identities = 181/750 (24%), Positives = 309/750 (41%), Gaps = 47/750 (6%)

Query: 1   MLNLAEYRQRPALLADWLPWAGLVAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSA 60
           M +L   R R      ++P+   V    +     +        G   ++A   +L A   
Sbjct: 1   MPSLTTLRSRELGPETFIPYVRHVDESTIALDSRALMVMIALEGVSFETADILDLNALHR 60

Query: 61  RLNNALRRLGSG-WALFIEAERRPTADYPRSEFPEPLSWLVDEERRAAFEESGNHFESIY 119
            LN   R +     AL+    RR    YP   F  P S  ++++ R       + F +  
Sbjct: 61  DLNTLYRNIADERLALWTHLIRRRDNSYPEGTFATPFSAALNDKYRERMVGE-DLFRNDL 119

Query: 120 HLTLAYLPPEESRARAARLLYENTPTTGVDWRERLQAFVAETDRVFDLLDGVM---PEIG 176
           +L++ + P  +   +AA+LL        V       A     D+V D+   +    P + 
Sbjct: 120 YLSILWSPARDPADKAAKLLSRLRRARRVGTELDEGALKHLRDKVIDVTAALRRFEPRVL 179

Query: 177 WLDEGQTLTY------LHATVSTRRYRLGVPEVPFHL-DALLADAPLVGG-LAPMLGDAH 228
            L E   L +      LH  V  RR    +P    H+  A+ +D  +VG     +  +A 
Sbjct: 180 TLYEHDGLMFSEPSEVLHQLVGGRREP--IPLTEGHIASAIYSDRVIVGRETIEIRHEAD 237

Query: 229 LRVATVRGF---PTSTWPGILDDLNRLGFAYRWSTRFLCLDKADAEKELIRLRRQWFAKR 285
            R A +  F   P  T  G+LD +    F    +  F  + KADA   + R + Q  +  
Sbjct: 238 SRYAGMLSFKEYPARTRTGMLDAVLTSPFELILAQSFSFVSKADARMIMGRKQNQMVSSG 297

Query: 286 KNVVALLRETIFQQESPLVDTDASNKATDADAALQELGGDQVAFGYVTTTVTVLDTDPAA 345
                                 A+++  + D A+ +L  ++  FG    T++V       
Sbjct: 298 DK--------------------AASQIEELDGAMDDLESNRFVFGEHHLTLSVFAPSVKE 337

Query: 346 ADEKLRRVERVIQGRGFVTIPETLNAVEAWLSSVPGNAYANVRQPIVSTLNLAHLMPVSA 405
             + L +    +   G V   E L    AW + +PGN     R   +++ N A L P  +
Sbjct: 338 LTDNLAKARASMTSGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALSPFHS 397

Query: 406 VWAGPEKNAHLGAPPLIVTRTEGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQF 465
              G +K+ +   P + + +T   +P+    H GD+G+T V GP+G GK+VLL  +  Q 
Sbjct: 398 YPLG-QKDGNEWGPAVALLKTASGSPYYFNFHYGDLGNTFVCGPSGAGKTVLLNFMLSQL 456

Query: 466 RRYRGSRIFAFDMGRSMRATILGLGGEHYDLGMDGEIAFQPLARIDREGD-RTWAAEWIE 524
            ++    +F FD  R     +   GG +  L         PL  ++   + + +   W+ 
Sbjct: 457 EKHDPHVVF-FDKDRGADLYVRAAGGTYLPLKNGIPTGCTPLKALELTPENKVFLTRWVG 515

Query: 525 GRLRHEGVAITPDEKGAIWSALGSLAGAPLEQRTMTGLSVLLQSN---ALRQALAPYVLG 581
             +      ++  E   I SA+  LA  P+E+RT+  L   L +     +   L  +  G
Sbjct: 516 KLVGSATRELSVTELRDISSAIDGLADLPVERRTIGALRTFLDNTNPEGIAARLRRWERG 575

Query: 582 GAHGKLLDADHDRLEIADAGSADVQCFEMEELMHSKAAVLAVLGYLFARFDERFDGAPTL 641
           G  G + D   + +   + G   +  ++M + + ++     ++ YLF R ++  DG   +
Sbjct: 576 GPLGWVFDNVIEDIGFGEFGGGKLVGYDMTDFLDNEEIRAPLMAYLFHRVEQLIDGRRII 635

Query: 642 LILDEAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADIKDSSIAPAVIESCASRI 701
           +++DE W  L D  F    +  LKT+RK+N  ++FATQS  D   S IA  +IE C ++I
Sbjct: 636 IVIDEFWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQI 695

Query: 702 FLPNPQATEPQIRTIYEGFGLNSRQIEIVA 731
           FLPN +          +GF L  R+ E+VA
Sbjct: 696 FLPNSRGNHGD---YVDGFKLTEREFELVA 722