Pairwise Alignments

Query, 748 a.a., macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides from Variovorax sp. SCN45

Subject, 598 a.a., peptidase, M1 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.6 bits (187), Expect = 3e-18
 Identities = 75/313 (23%), Positives = 123/313 (39%), Gaps = 37/313 (11%)

Query: 232 IVTQGETNYARQWFPGWDEPAFRHTFEISAEVPGDWKTVSNGAQLSAVKLPDGYQQVSFE 291
           + +Q +   AR W P  D P  R TF+   +VP   + V +        L   +Q   FE
Sbjct: 135 LFSQSQPINARSWIPLQDTPKVRITFDAKVQVPKGMRAVMSAMNHPETPLEGTFQ---FE 191

Query: 292 KTPSMPMYLTFFGGGK--FDILPDTFKNPLDGSDIPLRWFTPPGRSTWATFPMEWTKVAM 349
               +P +L     G   F ++      P  G       +T P     A      T+  +
Sbjct: 192 MEKPIPTHLLALAVGDLAFQVI-----GPRSGV------YTEPCMLEAAATEFADTEHML 240

Query: 350 DYYYKYTGIPLPIKKFDTIAANDSYNNKPNTGFGGMENWGAIFEFADAVLTKPGDKPTLY 409
           D      G P    ++D I         P+  FGGMEN    F     +    GDK    
Sbjct: 241 DVAQSLLG-PYAWGRYDMIIL------PPSFPFGGMENPRLAFLTPTLIA---GDKSL-- 288

Query: 410 SVTVVTHEIAHQWFGDLVTLDWWDNVWLNESFARWFERRTTIKFHPEYYSFSDYVLD--- 466
            V+ V HE+AH W G+LV+   W ++WLNE F  +F  R   + +    +  ++V++   
Sbjct: 289 -VSTVAHELAHSWTGNLVSNATWRDLWLNEGFTTYFTNRIVEQVYGREQAELEWVIEFGR 347

Query: 467 -KHSVIVADLRSTAVPVQRNLNDAGSFGFISPSIFVYNKGSHVLETVQNYIGEEAMQKGL 525
            +  +    L    +P      D      ++ + F Y+K S  +  ++  +G     K L
Sbjct: 348 LQEEIAALPLHRQTLPANVQQADPN----LAFNRFTYDKASMFVHDLERRLGRAEFDKFL 403

Query: 526 QIYLKDYGFGNVT 538
             Y++ + F  +T
Sbjct: 404 FTYVQHFAFKAIT 416