Pairwise Alignments

Query, 324 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 318 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  157 bits (396), Expect = 4e-43
 Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 7/311 (2%)

Query: 1   MELRQFRYFVAIVDCGSLSRAAQQLFIAQSALSKQMAELESELGTQLLLRSRNGVAMTEA 60
           ME +Q  YF+AI  CGSL+ AA+ + IAQ +LS Q+  LE  LG QL +RS  GV +T+A
Sbjct: 1   MEFKQLEYFLAIARCGSLASAAEVIGIAQPSLSVQLKNLEQRLGAQLFVRSPRGVMLTDA 60

Query: 61  GKVFYEYAQGITKQVSDAKAAVHVASDSVVGSVVAALPQSVSPMIALPLMRAAARRYPDV 120
           G V   +A+G+ + V DAK AV  A +   G VV   P SVS ++++PL       +P +
Sbjct: 61  GTVLLSHAEGLLRSVRDAKLAVRQAGEDASGRVVFGFPSSVSMVLSVPLAETIRHEHPKI 120

Query: 121 VLHLNEELTGNMADQLLRGRVDVAVFSPTMPAEDIAFTPLVEEDFVFLESPQS--PHALP 178
            L   + ++G + + L    VD+A+   T   +++  T L+EE+  F  +P+   P   P
Sbjct: 121 RLRAVDAMSGFIKEWLEEQTVDLAILYETSGLKNVEVTMLLEENLHFY-APRDLWPLKTP 179

Query: 179 PG-DVSIEQATARPLVWPANAHGHCTRWLVDGVLETAGYSPAQVAAEINSVYTLKAAVEA 237
           PG  V+I+  +   LV P+ +HG   R L++   + A      V  E++S+  +K+ V  
Sbjct: 180 PGTPVAIKDLSGVELVLPSKSHG--LRMLINHSTKGA-IRDLNVVVEMDSLTQIKSLVAR 236

Query: 238 GLGPTIMPLGLAQREVKEGRLAAHRIASPAMFRTLGLCVSVHLPTTNAKRAVCALIAEVI 297
           G   TI+    A      G LA+ +I  P + R + L  +   P T A   V      V+
Sbjct: 237 GSASTILAPAAASDFEARGELASSKIIDPVISRPVYLVRNPEKPRTRASSEVEKATIAVV 296

Query: 298 RTLCESGEWQG 308
           + L   G+W+G
Sbjct: 297 KDLVLRGQWRG 307