Pairwise Alignments

Query, 516 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  179 bits (453), Expect = 3e-49
 Identities = 153/542 (28%), Positives = 241/542 (44%), Gaps = 66/542 (12%)

Query: 5   DYLDKGAQLGAHSPCLTLGDTDL--SYAQVQRISWRVARGLRRAGVRPGDKVAVLSSNDA 62
           ++ +K AQ       L   D +L  +Y +    +  +A+GL   G++ GD + + + N  
Sbjct: 10  EFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVP 69

Query: 63  MAFATVFGISRAGCVWCPINPRNEASENAFVLDAFDCACLLFHGNYAD---------MVD 113
                +F  ++ G V   +N   ++ E A+V+   D   L    ++ D         +V 
Sbjct: 70  DWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVP 129

Query: 114 QMRT---------RLPKLRALVCLDARQ----------------LFAPSLDEWLEGLDDS 148
           +++T           P L+ ++ +   +                +    L E  +GLD  
Sbjct: 130 ELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDS- 188

Query: 149 PLDITPPDDVAMIAGTGGTTGQPKGVMLSGRNLEAMSALTLMGYPFEGRPAYLALAPLTH 208
                  DDV  +  T GTTG PKGVML+ +N+            F          PL H
Sbjct: 189 -------DDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFH 241

Query: 209 AAGVLCLPVMAL---GGRVVIMPKPDLGEFLGLIEARRITHTFLPPTLIYMLLQHPQLAS 265
             G++ L V+AL   GG +V++   D    L  I+  + T  +  PT+      HP    
Sbjct: 242 CFGIV-LGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEM 300

Query: 266 TQLDSLQCFWYGAAPMSATRLEEALQKIGPVMAQL-----FGQTEAPMMISMMSPREHFN 320
             L SL+          +T   EA++K+   M        +G TEA  + +M S  + F 
Sbjct: 301 FDLSSLRT----GIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFE 356

Query: 321 ADGTVARHRLSSAGRPGPLVQVGVMNGD-GALLPAGENGEIVVRGSLVMQGYYKDARATE 379
                   R+ S G+  P  +V +++ + G  L  G  GEI  RG  VM+GYYK    T 
Sbjct: 357 K-------RVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTA 409

Query: 380 EA-RRFGWHHTGDIGYLDADGYLYIVDRAKDMIISGGFNVYSAEVEQALMQHPDVQDSAV 438
           E   + GW H+GD+   D DGY  IV R KDMII GG N+Y  E+E+ L   P + D+ V
Sbjct: 410 EVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQV 469

Query: 439 VGLPDEKWGERVVAVLQLQAGRQVDPEEIKAFVKSRIGSVKAPKQIEVWLDLPRSKVGKV 498
           VG+PDEK+GE V A +  + G ++  E+++ F   +I   K PK + V  + P +  GK+
Sbjct: 470 VGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKI 529

Query: 499 LK 500
            K
Sbjct: 530 QK 531