Pairwise Alignments

Query, 319 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (439), Expect = 4e-48
 Identities = 98/282 (34%), Positives = 156/282 (55%), Gaps = 5/282 (1%)

Query: 26  LVDLVLLGALWGASFLFMRIGAAEFGALPAAAVRVAIASLFLLPIALLRGQGPTIAKHWK 85
           L+ L+ L A+WG SFLFMRI A  FG       RV  A+L L  +A L  +   I +HW 
Sbjct: 6   LLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWP 65

Query: 86  ASFAVGVFNSGLPFALFCFALLSINSGLAAVLNATTPMFGALVAWAWFRERPAGSRIVGL 145
               +G+ N+ +PF LF +A L++N    ++LN+T P++GA++ + W     +   + GL
Sbjct: 66  HFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGL 125

Query: 146 VIGFAGVAMLASRSAGVHAGATGHAALWAVLACLGACLCYGISASATRRHLGGVPALTTA 205
           ++G +GVA++     G    A GH A   ++    A   YG++ + T++    + A   A
Sbjct: 126 LLGVSGVAVI----VGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQ-APQLSAFENA 180

Query: 206 TGSQIGATLFLAIPAFMLWPTQMPSLRAWLALLALGIACTGIAYILFFRLIERAGPARAL 265
            GS   A L++A   + +   + PS   W A++ LG+ CTG+AY+++FRL++  G A  L
Sbjct: 181 HGSMWAACLWVAPLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTL 240

Query: 266 TVTFLVPVFALFYGAVFLDEHITQWMLICAAVIVCGVALSTG 307
           +VTFL+PVF + +G   LDE I    L    +++ G  L TG
Sbjct: 241 SVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLVTG 282



 Score = 30.0 bits (66), Expect = 7e-05
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 84  WKASFAVGVFNSGLPFALFCFALLSINSGLAAVLNATTPMFGALVAWAWFRERPAG-SRI 142
           W A   +GV  +GL + ++   + +I +     +    P+FG L  + W  + P G + +
Sbjct: 209 WGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGILWGY-WILDEPIGLNTL 267

Query: 143 VGLVIGFAGVAMLASRS 159
            G ++  AG  ++   S
Sbjct: 268 FGTLLVLAGTMLVTGFS 284