Pairwise Alignments

Query, 319 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 320 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score =  131 bits (329), Expect = 2e-35
 Identities = 93/283 (32%), Positives = 138/283 (48%), Gaps = 11/283 (3%)

Query: 29  LVLLGALWGASFLFMRIGAAEFGALPAAAVRVAIASLFLLPIALLRGQG---PTIAKHWK 85
           L++L  LWGAS+ F++IG      L   A+R  IA   L   A++ G+G   P     W 
Sbjct: 14  LLMLATLWGASYTFIKIGVETIPPLTLIALRTLIAGTLLA--AIIGGRGLRLPNDRGTWA 71

Query: 86  ASFAVGVFNSGLPFALFCFALLSINSGLAAVLNATTPMFGALVAWAWFR-ERPAGSRIVG 144
                   NS +PF L  +A  + ++GLAA+LNATTP+F  L+     R E  +G +++G
Sbjct: 72  RFLVQACLNSAIPFTLIAWAEQTTDAGLAAILNATTPVFAFLMTALITRHEAVSGRKLLG 131

Query: 145 LVIGFAGVAMLASRSAGVHAGATGHAALWAVLACLGACLCYGISASATRRHLGGVPALTT 204
           ++ G AG+ ++     GV A       LWA LA + A LCY  +A   +   G  P +  
Sbjct: 132 VIAGLAGIGLIV----GVQALGGLGRELWAQLAIVAATLCYAAAAIFGKTFKGLDPMMPA 187

Query: 205 ATGSQIGATLFLAIPAFMLWP-TQMPSLRAWLALLALGIACTGIAYILFFRLIERAGPAR 263
           A     GA L + +   +  P T  PS R+ LALLAL +  T +A+ L+FRLI+  G   
Sbjct: 188 AGSLICGAALLVPLSLVVDHPWTLAPSGRSLLALLALSVFSTALAFALYFRLIQTLGSIG 247

Query: 264 ALTVTFLVPVFALFYGAVFLDEHITQWMLICAAVIVCGVALST 306
                +L     +  G V L E ++    +    +V GV   T
Sbjct: 248 TTAQAYLRVPIGVAIGVVVLGEDLSATAWLGLGCVVAGVIAMT 290