Pairwise Alignments

Query, 319 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 299 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 18/291 (6%)

Query: 29  LVLLGALWGA-SFLFMRIGAAEFGALPAAAVRVAIASLFLLPIALLRGQGPTIAKHWKAS 87
           L++    +GA +F+  +IG  E        +R  IAS  +LP+ L +       K   A 
Sbjct: 13  LMIPAVFFGAGAFITGKIGILELSWDELTFLRFLIASAIILPLVLKKEHKNLKLKKNDAY 72

Query: 88  FAV--GVFNSGLPFALFCFALLSINSGLAAVLNATTPMFGALVAWAWFRERPAGSRIVGL 145
             +  G+F      ALF  +L  I +  +A+L ATTPM  +++A     E     RI  +
Sbjct: 73  IVILAGLFGMFGYHALFFMSLEYITAINSALLMATTPMVTSIIAAVVLGEYFGIKRIFAV 132

Query: 146 VIGFAGVAM-LASRSAGVHAGAT---GHAALWAVLACLGACLCYGISASATRRHLGGVPA 201
            I F GV + + + +  V    +   G   +++ + C+     Y + +    +     P+
Sbjct: 133 FIAFFGVLLTITNGNLEVLKNLSFNIGDVIMFSAVLCMAL---YAVLSKKVAQKYS--PS 187

Query: 202 LTTATGSQIGATLFLAIPAFMLW-PTQM---PSLRAWLALLALGIACTGIAYILFFRLIE 257
           L    G  +  T+ L IP  +L  P  +    SL  WL+++ + +  + +A +L    ++
Sbjct: 188 LILTYGYIL--TVVLLIPYMILKNPINVILNASLETWLSIIYMAVFASVLAQLLQQISLK 245

Query: 258 RAGPARALTVTFLVPVFALFYGAVFLDEHITQWMLICAAVIVCGVALSTGV 308
             G ++ +     VP+  +   A+FL E  T+   I    I+ GV +++ +
Sbjct: 246 YHGASKTMLFYQFVPIIVIGLSAIFLKEPFTKITAISTLFIMGGVYINSTI 296