Pairwise Alignments

Query, 517 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

Subject, 479 a.a., Type I secretion outer membrane protein, TolC precursor from Pseudomonas fluorescens FW300-N2E2

 Score =  200 bits (509), Expect = 8e-56
 Identities = 138/430 (32%), Positives = 219/430 (50%), Gaps = 21/430 (4%)

Query: 31  LNELYDAARSYDATYQGARAQYDANVARAAQAKAGILPAVGLTAGVTRSDIEIDTLTGTG 90
           L  +Y  A   +A    ARAQY A      QA+AG+LP +   A +  +  E+D    T 
Sbjct: 32  LVSVYQEAVDNNADLAAARAQYGAQKEVVPQARAGLLPNLSAGADLNNTRTELDQPAMTA 91

Query: 91  RGTTTPRDFNTQNVGINATQPLYRPANWATYEQGKRQADIARAVFTIAEQDLIVRVSQAY 150
             ++T             +QP++R   W   +  K   + A    +  EQ++I++ +++Y
Sbjct: 92  NRSSTVYQ-------ATLSQPIFRADRWFQLQAAKSVDEQASLQLSATEQNMILQSAESY 144

Query: 151 FDVLASQDSLALVRAQKVAVAEQLASAKRNFEVGTSTITDSREAQARYDLVTAQEIAAEN 210
           F+VL SQD+LA  +A++ A   QL  +   F+VG S  TD  ++QA YD   A  I A+ 
Sbjct: 145 FNVLRSQDNLASTKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRILAQR 204

Query: 211 DLQVKKVVLDQLVGRP-GSVPVPLAVPVVLPTALPADINAWVAQADEVHPAIQQARLGVD 269
            +      L  L  R   S+   +    +LP A P D  AWV  A + +  +  +   V 
Sbjct: 205 QVDDAFEALITLTNRQYNSLQGIVHTLPILPPA-PNDAKAWVDTAAKQNLNLLASNYAVT 263

Query: 270 VAGLEVEKAKAGHKPTLDA--------NLGYNVTR-NPTGTTTSAVGTRANATTVGVTFN 320
            A   + + KAGH PTLDA        N G   T  NPTG      G  A   T+G+  +
Sbjct: 264 AAEDTLRQRKAGHAPTLDAIAQYKKGDNDGLGFTNPNPTG---QRYGGDAEQRTIGLQLS 320

Query: 321 LPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRSAYLGLVSGAGQVKALEAAES 380
           +PL++G  T ++++E+ +   Q+    E  RR V + TR+ +  + +   QV+A   +  
Sbjct: 321 IPLYSGGLTSSQVRESYSQLTQTEQQREALRRQVVENTRNLHRAVNTDVEQVQARRQSII 380

Query: 381 SSQSALDANRLGYQVGVRINIDVLNSQSQLFQTKRDLAQARYNVLLGNLKLRQANGTLTT 440
           S+QSA++A  +GYQVG R  +DVL++Q QL+ + R+   ARY+ +L NL+L+QA GTL+ 
Sbjct: 381 SNQSAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNARYDYILDNLRLKQAAGTLSP 440

Query: 441 DDMHAINATL 450
            D+  ++  L
Sbjct: 441 ADLQDLSRYL 450