Pairwise Alignments

Query, 517 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

Subject, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

 Score =  228 bits (580), Expect = 4e-64
 Identities = 147/449 (32%), Positives = 235/449 (52%), Gaps = 22/449 (4%)

Query: 6   RLSPL--SAALASTFAALLALPAQGQTLNELYDAARSYDATYQGARAQYDANVARAAQAK 63
           +L PL  SAAL +  +A+ A     + L E+Y+ A+  D       AQ DA       ++
Sbjct: 3   KLLPLFVSAALGTLSSAVWA-----ENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSR 57

Query: 64  AGILPAVGLTAG--VTRSDIEIDTLTGTGRGTTTPRDFNTQNVGINATQPLYRPANWATY 121
           + +LP + LTAG  + RSD               PR+ +  + GIN +Q LY+ ++W + 
Sbjct: 58  SALLPQINLTAGYNINRSD-------------QAPRESDLLSAGINFSQELYQRSSWVSL 104

Query: 122 EQGKRQADIARAVFTIAEQDLIVRVSQAYFDVLASQDSLALVRAQKVAVAEQLASAKRNF 181
           +  +++A  A + +   +Q LI+RV++AYF+VL +QD+L  VRA+K AV  QL   K+ F
Sbjct: 105 DTAEKKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRF 164

Query: 182 EVGTSTITDSREAQARYDLVTAQEIAAENDLQVKKVVLDQLVGRPGSVPVPLAVPVVLPT 241
           EVG S ITD  +AQA++D V A E+ AEN L      L ++ G+  S    L       +
Sbjct: 165 EVGLSAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAAS 224

Query: 242 ALPADINAWVAQADEVHPAIQQARLGVDVAGLEVEKAKAGHKPTLDANLGYNVTRNPTGT 301
                  A + +A + + ++  AR+  DVA   +  A +GH P+L  + GYN   N    
Sbjct: 225 RTTESSEALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDN 284

Query: 302 TTSAVGTRANATTVGVTFNLPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRSA 361
             +  G   N   +GV   +PL+ G  T +  K+       +   LE   R+V +  R+ 
Sbjct: 285 AKNTSGEEYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAY 344

Query: 362 YLGLVSGAGQVKALEAAESSSQSALDANRLGYQVGVRINIDVLNSQSQLFQTKRDLAQAR 421
              + +  G ++A E A  S++SAL+A   G+ VG R  +DVL++  +L+   ++L+ AR
Sbjct: 345 NNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNAR 404

Query: 422 YNVLLGNLKLRQANGTLTTDDMHAINATL 450
           Y+ +L  L+LRQA GTL+  D+  +NA L
Sbjct: 405 YDYILSVLQLRQAIGTLSEQDVMDVNAGL 433