Pairwise Alignments

Query, 517 a.a., Type I secretion outer membrane protein, TolC family from Variovorax sp. SCN45

Subject, 449 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score =  206 bits (523), Expect = 2e-57
 Identities = 138/443 (31%), Positives = 219/443 (49%), Gaps = 9/443 (2%)

Query: 9   PLSAALASTFAALLALPAQGQTLNELYDAARSYDATYQGARAQYDANVARAAQAKAGILP 68
           P  AAL +      A  +Q     ++Y+ A   D  Y GA  + DA +      +AG+LP
Sbjct: 5   PFKAALLTAILLGTAPLSQAMGPFQVYELALRNDPVYLGALKERDAGLENRVIGRAGLLP 64

Query: 69  AVGLTAGVTRSDIEIDTLTGTGRGTTTPRDFNTQNVGINATQPLYRPANWATYEQGKRQA 128
            V  +    R+D +  TL G+ + TT  R +N+    +   QPL     +A Y +G  QA
Sbjct: 65  RVSYSYNKGRNDSKA-TLKGSAQDTTDHRHYNSFGSSLTVQQPLIDYEAYANYRKGLAQA 123

Query: 129 DIARAVFTIAEQDLIVRVSQAYFDVLASQDSLALVRAQKVAVAEQLASAKRNFEVGTSTI 188
             A   F    Q+L+VRV   Y   L +QD + + RA++ A   Q A  ++ FE G  T 
Sbjct: 124 LFADETFRSKSQELLVRVLTLYTQALFAQDQINIARAKQQAFERQFAQNRQMFERGEGTR 183

Query: 189 TDSREAQARYDLVTAQEIAAENDLQVKKVVLDQLVGRPGSVPV----PLAVPVVLPTALP 244
           TD  EA++R +L  A++I A ++       L  L+G P S+ V    PL          P
Sbjct: 184 TDILEAESRNELAIAEQIEASDEQDAALRELAALLGEP-SIDVAQLEPLRDSFQALVLAP 242

Query: 245 ADINAWVAQADEVHPAIQQARLGVDVAGLEVEKAKAGHKPTLDANLGYNVTRNPTGTTTS 304
           +    W A A    P +   R  ++VA  EVE+ +AGH PT++A        + +G T +
Sbjct: 243 SSFTEWHALAMANSPILASQRQSLEVARYEVERNRAGHLPTVNAYASIRQNESDSGNTYN 302

Query: 305 AVGTRANATTVGVTFNLPLFAGFATENRIKETLALEDQSRSVLEGTRRNVAQATRSAYLG 364
               R +  T+G+  +LPL+AG  T   +++  +  +Q+   LEG  R      R  +  
Sbjct: 303 Q---RYDTNTIGIELSLPLYAGGGTSASVRQANSKREQAEYELEGKTRETLIELRRQFNA 359

Query: 365 LVSGAGQVKALEAAESSSQSALDANRLGYQVGVRINIDVLNSQSQLFQTKRDLAQARYNV 424
             SG  +++A + A  S+Q+ +++ R     G RI++D LN++ QL+ T+RDLA+ARY+ 
Sbjct: 360 CASGVNKLRAYQKALISAQALVESTRQSILGGERISLDALNAEQQLYSTRRDLAKARYDY 419

Query: 425 LLGNLKLRQANGTLTTDDMHAIN 447
           L+  +KL    GTL   D+  I+
Sbjct: 420 LMAWIKLHYYAGTLRDTDLARID 442