Pairwise Alignments

Query, 185 a.a., Cytochrome c oxidase polypeptide II (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 50.1 bits (118), Expect = 4e-11
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 26/157 (16%)

Query: 39  ATALAAAKPPAVVI----SAPAPGAEP--KVAEVTETVTVTIPDGASIRVVDGVVNFYFA 92
           A     ++ PA V+    + PAP A P  KVA VT+T T    D ++           FA
Sbjct: 166 AYKFGGSEEPAPVVEQRPAEPAPVAAPVEKVA-VTKTFTFQHLDSST-----------FA 213

Query: 93  TGSADLAPGAAEALAAVIKGVESGRKAVIS--GFHDTTGDAAINEQLAKKRAEMVRDVLV 150
           T SA+L P   + L  ++  +    +A +   G  D+TG  A N++L+++RA+ V   L 
Sbjct: 214 TASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALE 273

Query: 151 GLGVPASKVDLHKPEVTAGTGNNAEA------RRVEV 181
             G+ AS++       ++   +NA A      RRVE+
Sbjct: 274 AQGIDASRISAKGLGESSPIASNATAEGREKNRRVEL 310