Pairwise Alignments

Query, 328 a.a., no description from Variovorax sp. SCN45

Subject, 345 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 82/319 (25%), Positives = 133/319 (41%), Gaps = 23/319 (7%)

Query: 23  PADVLRLAGLPDDLLHQPSVRLASADFYRLWDGIEAAVGDPLLPLRLCQAICSESFSPVL 82
           P  +L   GL  + L +P  RL+   + RL        GDP L L + +           
Sbjct: 30  PKPLLEAYGLDAERLAEPHARLSIPRYMRLGHAAIQLAGDPALGLEMGRLRKPGHLGLAG 89

Query: 83  FAALCSPNMLVAAQRIARYKTLIAPMRLDVTQADGLTTLEFSWLD-HTVSPPAS---LVL 138
             A  +P +  AA+ + RY+ L A      +          +WL  +++SP  +    V+
Sbjct: 90  LTAAQAPTVREAARALIRYEALYASNYRGSSSFH--EDAAGAWLRFYSISPYNAYNRFVV 147

Query: 139 MELL--FCVTLARMGTREPIRPVVVQAQVLPSPLAPYEEFLGARLTRGAR--------RL 188
             +L  +   LAR+  +  +   +      P     YE   G  +   A+        R 
Sbjct: 148 DTVLASWVAQLARLSGQAIVPTAIHIDFAAPDYAQRYEALFGRPVCFEAQANQLQLDQRT 207

Query: 189 VSFANADAALPFLTSNEPLWAAFEPELRQRLSHLDAQATTTQRVRAALLEGLPSGLVTIE 248
           ++  N D       +   L    E EL +R      +    Q +   +L+G    L   +
Sbjct: 208 LAQRNPDHCPG---TWRHLLELCEAELERRTRTRSLRERVAQ-ILGPMLKGQEPDL---Q 260

Query: 249 DIARKLALSRRTLQRRVDAEGTSFQQILNGTREALARHYLEKTALPIAEISFLLGFDESN 308
            IA +L +   TL+R++  E +S++ ILN TR  LA  Y+  T     EI++LLGF  + 
Sbjct: 261 QIAARLQMPAWTLRRKLAEEDSSYRVILNDTRRDLAMAYIRDTESAFGEIAWLLGFSSAE 320

Query: 309 SFHRAFRGWTGSTPDRVRR 327
           +F RAF+ W+G TP   RR
Sbjct: 321 AFQRAFKRWSGQTPGDYRR 339