Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  106 bits (265), Expect = 4e-28
 Identities = 63/224 (28%), Positives = 109/224 (48%)

Query: 35  HTHRRGQLIHAISGVMLVSAVAGSWVVPTGRGVWVPAGMEHQIRMAGEVKMRTVFVEPGT 94
           H+H  GQ+     G++ + A    ++ P    +WVPAG+ H+      ++  ++ +    
Sbjct: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96

Query: 95  RADLGAECRVIHVGALLRELIVTAVALPLDYAPGGRDERVMELILDEIQAAPVLSLHVPM 154
                A+  +I V +++  +I       ++ A    D+R+++++LD++         +P 
Sbjct: 97  TTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQVLLDQLATRETQHHFLPS 156

Query: 155 PRHARLAVLCEELVRDPSLPATLDDWALRLHMNTRTLARLFQRETGMNFGAWCRQARLLL 214
             H  LA +   +  +P+   TL  WA ++H   RTLAR  Q E GM+F  W  + R L 
Sbjct: 157 TNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRVRYLY 216

Query: 215 SLPQLAAGASILEVALAHGYESPSAFTAMFRRTLGVPPSQYLGR 258
           S+  L  G ++ EVAL  GY   S F  MF++  G+ P QY  R
Sbjct: 217 SMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYKSR 260