Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 248 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  185 bits (470), Expect = 7e-52
 Identities = 103/223 (46%), Positives = 141/223 (63%), Gaps = 4/223 (1%)

Query: 35  HTHRRGQLIHAISGVMLVSAVAGSWVVPTGRGVWVPAGMEHQIRMAGEVKMRTVFVEPGT 94
           H+H + QLI+AI+GV+ V+   G+WVVP  R VWVPAG+EH  +    V+ R++ ++   
Sbjct: 25  HSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKSHSAVQFRSLLIDAVE 84

Query: 95  RADLGAECRVIHVGALLRELIVTAVALPLDYAPGGRD--ERVMELILDEIQAAPVLSLHV 152
              L   C  + V  LLRELI+  VA+    APG  +    V +L+L E+ + PV  L +
Sbjct: 85  VMGLPVVCMAMEVTPLLRELILRLVAIA--DAPGSVELSRVVTQLLLMELASLPVEPLSL 142

Query: 153 PMPRHARLAVLCEELVRDPSLPATLDDWALRLHMNTRTLARLFQRETGMNFGAWCRQARL 212
           P PRH  LA  C+++  +P+   +L+  A  LHM+  +  RLFQ ETGM+F  W +QARL
Sbjct: 143 PTPRHPPLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHETGMSFLRWRQQARL 202

Query: 213 LLSLPQLAAGASILEVALAHGYESPSAFTAMFRRTLGVPPSQY 255
           L +L  LA G SIL VALA GY+SPSAF+AMFRR LG  PS+Y
Sbjct: 203 LHALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSEY 245