Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 270 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  118 bits (295), Expect = 1e-31
 Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 14/263 (5%)

Query: 1   MDKAINLRPEEGEST---PRAVAVLATDPAGDAFIPPHTHRRGQLIHAISGVMLVSAVAG 57
           + KA  L P +   T    R V   A +   +  + PH+H RGQL+ A  G++ V +   
Sbjct: 5   ISKATMLAPSQFAFTLDANRPVLSNARNLEAEMGVEPHSHPRGQLLWAAKGILRVQSDNA 64

Query: 58  SWVVPTGRGVWVPAGMEHQIRMAGEVKMRTVFVEPGTRADL-GAECRVIHVGALLRELIV 116
            WVVP+   VW+P+G  HQI    +  +R ++++P  R  +   +  ++ +  L+RE+++
Sbjct: 65  VWVVPSTHAVWLPSGCRHQINCETQAHLRNLYIDPSYRVRVQDTQVVMVTMTPLMREMVL 124

Query: 117 T----AVALPLDYAPGGRDERVMELILDEIQAAPVLSLHVPMPRHARLAVLCEELVRDPS 172
                A   P  Y   G         +DE+ A   ++ ++      RL  + + L++ P 
Sbjct: 125 KLCQDATMEPAKYFRLGLSA------IDELDALDSVNTYLNAGSDPRLGRVIQLLIKKPQ 178

Query: 173 LPATLDDWALRLHMNTRTLARLFQRETGMNFGAWCRQARLLLSLPQLAAGASILEVALAH 232
              TL + A     + RT+ RLF+ ETG  +  W ++ RLL SL +L  G S   VA + 
Sbjct: 179 AEYTLAELAQSAGASIRTIERLFKAETGQTYRQWRQRYRLLNSLERLTQGESTTSVAHSL 238

Query: 233 GYESPSAFTAMFRRTLGVPPSQY 255
           GY S S+F+A F+   G  P +Y
Sbjct: 239 GYLSVSSFSAAFKALFGCTPQEY 261