Pairwise Alignments

Query, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  266 bits (679), Expect = 1e-75
 Identities = 152/426 (35%), Positives = 242/426 (56%), Gaps = 7/426 (1%)

Query: 1   MSVVMVATMVLCFALSISVAVSIGLASILGIQVTNANMLISVKEMFNSINKFPLAAIPFF 60
           M  ++VA  +  F L   V  +I L SIL + V      +  + +  +++ FPL A+P F
Sbjct: 1   MGFLVVAAFLGLFMLGFPVVYAILLPSILYVLVEGLPFGLLAQRITYALDSFPLVAVPLF 60

Query: 61  ILAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAIL 120
           I  GNLM   GI+ R+  FA ++VG + GGL    V   +IF+ +SG+++A    +G I 
Sbjct: 61  IFVGNLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGGLGRIE 120

Query: 121 IPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILIS 180
           I A+ K G+  S+A A+ A SA LG I PPSIP+I+YG    VSI +L +AG  P +L +
Sbjct: 121 IDAMKKRGFDPSFAGAVTAASATLGPIFPPSIPLIVYGSVTSVSIVQLLVAGIMPAVLCT 180

Query: 181 LALMLFVWVYCKWKGWGKNDGEGRMPFGR----ALWQAGWALLMPVIILGGIYGGVFTPT 236
             LML V +     G  + +   R P        L  A  A+L P +++GG+  G FTPT
Sbjct: 181 ALLMLTVLIVAIRHGHARAE---RWPTAGELVGTLVPALPAILAPALMVGGMTAGAFTPT 237

Query: 237 EASAVAVFYALVVGMVIYREIKLKDLYVILRKSVMSSAVIMFIIANAGLFAFLITRAGVP 296
           EA+A+   Y + +  V+YRE+    L+     +  SS+ I+ I+A+A LF +++    VP
Sbjct: 238 EAAAITAVYVIFISGVLYRELTPAHLWHSAVLTARSSSAILIIVASAALFGWILAVEQVP 297

Query: 297 DAIGHWLQQVLQSPAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVHFGIDPVHFG 356
                 L    + P M L+  N   FV GMF++++ A ++L PI+AP  V  G+DPV  G
Sbjct: 298 QTFAAALLGWSKDPLMLLIIANLIFFVAGMFLDSTTATLLLVPIIAPPLVMAGVDPVQLG 357

Query: 357 LIMVVNLALGMITPPFGVNLFAACTVARISLDRIVRHLVPFVLVIMACLMVITYVPWVSL 416
           ++ + NL LG++TPP G++LF    +A++S+ +++R LVPF + +++ L+++T     +L
Sbjct: 358 IVTIFNLMLGLLTPPMGLSLFLVSDIAKVSIRQLLRALVPFYIPLVSTLVILTLAKDFTL 417

Query: 417 ALRDLV 422
            L  L+
Sbjct: 418 WLPRLI 423