Pairwise Alignments

Query, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 426 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  279 bits (714), Expect = 1e-79
 Identities = 146/405 (36%), Positives = 254/405 (62%), Gaps = 11/405 (2%)

Query: 14  ALSISVAVSI---GLASILGIQVTNANMLISVKEMFNSINKFPLAAIPFFILAGNLMETG 70
           AL + +A ++   G+A +L + + +A ++   + + N  + FPL A+PFF+LAG +M TG
Sbjct: 15  ALGVPIAFALILSGVALMLYLGLFDAQIV--AQNVLNGADSFPLMAVPFFLLAGEVMNTG 72

Query: 71  GISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILIPALIKHGYP 130
           G+SRR+V  A ++VG ++GGL    +    I +++SGS+VA   A+GA+L+P ++K G+ 
Sbjct: 73  GLSRRIVALAMAMVGHIRGGLGFVAIFAACILSSLSGSAVADAAALGALLLPMMLKSGHD 132

Query: 131 TSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILISLALMLFVWVY 190
            + A+ L A+++ +G IIPPSI  IL+GV   VSI +LF+AG  PG++I+ AL +   + 
Sbjct: 133 PARASGLIASASIIGPIIPPSIGFILFGVVGGVSITKLFLAGIFPGLMIAAALSITWLIV 192

Query: 191 CKWKGWG---KNDGEGRMPFGRALWQAGWALLMPVIILGGIYGGVFTPTEASAVAVFYAL 247
            + + +    +  G  R+   RA   + WAL +PVII+ G+  GVFTPTEA  +A  Y+L
Sbjct: 193 ARKEQFELPPRQSGRLRL---RAFVDSLWALFLPVIIIAGLKFGVFTPTEAGVIAAVYSL 249

Query: 248 VVGMVIYREIKLKDLYVILRKSVMSSAVIMFIIANAGLFAFLITRAGVPDAIGHWLQQVL 307
            V MV+YRE+    L+ +   +   SAV+MF++A A + A+LIT A VP A+   L+ ++
Sbjct: 250 FVSMVVYRELAPAQLFHVFVSAAKISAVVMFLVACAAVSAWLITVADVPGALAALLEPLM 309

Query: 308 QSPAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVHFGIDPVHFGLIMVVNLALGM 367
            +    L+ +   + ++G  ++ +  I+++ P+L PV    GIDPV+FG++ ++N ++G+
Sbjct: 310 GNQTALLIAIMVLIVIVGTAMDMTPTILIMTPVLMPVIKQAGIDPVYFGVLFIINNSIGL 369

Query: 368 ITPPFGVNLFAACTVARISLDRIVRHLVPFVLVIMACLMVITYVP 412
           ITPP G  L   C V+++S++ +++ ++PF+   +  L ++   P
Sbjct: 370 ITPPVGTVLNVICGVSKLSMEDLMKGVMPFLFAELIVLFLLVLFP 414