Pairwise Alignments

Query, 229 a.a., Two-component system response regulator QseB from Variovorax sp. SCN45

Subject, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (356), Expect = 9e-39
 Identities = 86/223 (38%), Positives = 127/223 (56%), Gaps = 10/223 (4%)

Query: 1   MKILLAEDDFDLATGIRVALQTQGMDVVWVRRIEE----AMRILDEQGCDLLLLDLGLPD 56
           MKIL+ EDD  L   I  AL+  G    WV  + +    A+     +  D+++LDLGLP 
Sbjct: 1   MKILVVEDDVQLGQQILSALEQTG----WVPELAQDGIDALYRATAEEWDVIVLDLGLPK 56

Query: 57  GDGLAVLERLRREGARLPVLILSARDGLNDRLLGLDNGADDYLVKPFVLAELISRVRALT 116
            DGL VL+ +R E    PV+ILSARD L  R+ GL+ GADDYL KPF + ELI+R+RA  
Sbjct: 57  LDGLTVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQL 116

Query: 117 RRSYGGDGATFEVRGLWLHEPTQRVRVNGEPVALSRSEFKLLTLLVKRADRVVARRMLEQ 176
           RR+ G      +V  L L   T +V   G+ V+L+  E+K++   +   ++V++R   E 
Sbjct: 117 RRASGNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISR--TEL 174

Query: 177 LALVSMPGQSPGSNVLDVHISNLRRKIGDGYIRTVRGIGYVIY 219
           +  +        SN ++V I  +R+KI    I+TVRG+GY ++
Sbjct: 175 VEHIYKQDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGYQLH 217