Pairwise Alignments

Query, 322 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Variovorax sp. SCN45

Subject, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  120 bits (301), Expect = 4e-32
 Identities = 85/296 (28%), Positives = 146/296 (49%), Gaps = 6/296 (2%)

Query: 7   AAACLSLALSSVAFAQTTMKISISTAQ-NSHQGV--AIDTFAKEVEKRTGGRYKVQTFYN 63
           AAA  +L+   +A AQ    +  ST+Q N ++ +  A+ T+A+ V +R+GGR  +     
Sbjct: 7   AAAMAALSFCGIANAQE-YSLRFSTSQVNPNEPIIKAMKTYAERVGERSGGRIAITVMTG 65

Query: 64  GSLGGERESIEAVQLGTQELAFSSTGPVPNFVPETKILDVPFLFRDKAHARAVLDGPIGQ 123
             LG +++  E V  G   L+ +  G +  FVP+  IL  P+++ D A    +    + +
Sbjct: 66  DQLGAQKKVNEMVMSGASLLSATDYGQLGQFVPDLSILAGPYVYPDLAATDRLFASDLYK 125

Query: 124 DMLTKFDAKGFKALAW-AENGFRHMTNSKRDVKAPEDLKGLKMRTMENPVHIAAYKGFGI 182
           D+  K +A+G K +      G+RH+  +K  V++P DL G+ +R   +P+ +A +  +G 
Sbjct: 126 DLSGKLEARGIKIIMPNGLFGYRHIIANK-PVRSPADLAGVTIRVPSSPIMMATFGNYGA 184

Query: 183 ITTPMAFPEVFTALQQGTVDGQENPLPVIISAKFDQVQKHLSLTGHVYSPCIFVMNKATF 242
             T + + +V+ ALQ G VD  E P   I  AK ++ +K +S TGH      +V +   F
Sbjct: 185 RPTELPWGDVYNALQTGVVDAAEGPFGSIAGAKLNETRKVISKTGHQIMFTAWVASSQFF 244

Query: 243 DKLSAADKQAFLDAAKEGTKANRARVDEDDAKGVADLRAKGMTVVDNVDKARFVAA 298
           + L    +   L+  +   K       E D      L A G+ +V +VD   F+ A
Sbjct: 245 NSLPEDLQTILLEEGQTIAKELTQMTLETDDAYAKQLAASGVEIVTDVDIPSFIEA 300