Pairwise Alignments

Query, 322 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Variovorax sp. SCN45

Subject, 323 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  165 bits (418), Expect = 1e-45
 Identities = 103/326 (31%), Positives = 172/326 (52%), Gaps = 7/326 (2%)

Query: 1   MKFGPIAAACLSLALSSVAFAQT--TMKISISTAQNSHQGVAIDTFAKEVEKRTGGRYKV 58
           MK G I+ A   L ++S A AQ   T+++ +       Q   +   A+ +++++GGR  +
Sbjct: 1   MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTL 60

Query: 59  QTFYNGSLGGERESIEAVQLGTQELAFSSTGPVPNFVPETKILDVPFLFRDKAHARAVLD 118
           + F N  LG   E +E V LG  +   +  G +  +VP   +    ++  D  H + ++ 
Sbjct: 61  EIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIA 120

Query: 119 GPIGQDMLTKF--DAKGFKALAWAENGFRHMTNSKRDVKAPEDLKGLKMRTMENPVHIAA 176
              G+ ++ +   + K     +W   G RH T +K+ ++ P D  G+K+R   +   +  
Sbjct: 121 SDWGKGIVDEMRTEHKWRMVDSWYF-GTRH-TTAKKPIEKPADFAGMKLRVPNSAPLLTW 178

Query: 177 YKGFGIITTPMAFPEVFTALQQGTVDGQENPLPVIISAKFDQVQKHLSLTGHVYSPCIFV 236
            K  G   TP+AF EV+ ALQ   VDGQENPLP+I S KF +VQ H+SLTGH+    + +
Sbjct: 179 AKAMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVIL 238

Query: 237 MNKATFDKLSAADKQAFLDAAKEGTKANRARVDEDDAKGVADLRAKGMTVVDNVDKARFV 296
           M++ T++ L  AD++  ++A + G   N   V + +A  V+D R +G+TVV+  DKA F 
Sbjct: 239 MSEDTWNALEPADQKVVMEAFEAGGALNDKLVSDKEANLVSDFRERGITVVE-PDKAAFQ 297

Query: 297 AALAPVNAQFEKDFGKANLDKIRDYK 322
            A+ PV A  +  FG   +  + D +
Sbjct: 298 EAMKPVYADLDAKFGADTVKTLLDLR 323