Pairwise Alignments

Query, 451 a.a., Sensor protein BasS/PmrB (activates BasR/PmrA) from Variovorax sp. SCN45

Subject, 444 a.a., Sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (315), Expect = 2e-33
 Identities = 129/442 (29%), Positives = 200/442 (45%), Gaps = 32/442 (7%)

Query: 13  SLAGRLTRTLIVWVGGVWLMCVLAVVWYVD---REINHNFDNELVEVSHRMFDMAVQELD 69
           SL  RL+ TL      +W    LA VW +     ++  + D  LV  S RM    ++++ 
Sbjct: 3   SLRLRLSLTLGAAFALIW---ALAAVWMLSDLRNQMMFSLDQRLV-ASARMVAGLLEQMP 58

Query: 70  KLQHTS-GTAPTEPLIAPKQLFSEDAVMYQVVDTHEHVLLRSAETPAGTFDVPLAAGFAN 128
            L     GT      ++ +QL     +  QV      +L RS  TP  T +     GF +
Sbjct: 59  PLPSKGDGTH-----LSSEQLSIPGGMACQVSSLRGEILARSHGTPEQTLEAE-KMGFHD 112

Query: 129 NQT----WRIYTVRHPTLGLYFQVADPLDERRRALNRTLFGLIIPLG-AVLPLLALVLRN 183
                  WR +T+    L +    AD   ER       L    +P+G A+L  L L+   
Sbjct: 113 QMIDGAPWRSFTLARGDLRI--TTADRQIEREALNMSILLAASVPVGVALLGCLCLLWLG 170

Query: 184 VARAELRVLQQLAGEIAKRNGADLRPITLPGLPQELRSVGDHVNRLLERLSQSLDVERAL 243
           + +  L  L ++   + +R+   L P+ +  LP ELR + +  N+L +R+ ++++ ER L
Sbjct: 171 IGQG-LAPLNRMRDALMRRSADSLEPLQIHPLPSELRPLLETQNQLFQRIGKTIERERRL 229

Query: 244 AANAAHELRTPLAAARLRLQTA--LEHDLRRNDVQAALDALQMLSHRAEKLLQLSRAESG 301
             +AAHELR+PL A +  LQ A   E   R   +  A +    +    E+LL L+R E  
Sbjct: 230 TGDAAHELRSPLTAIKTHLQVARMTEGAARDQSLARAEEGTDRMHRTLEQLLLLARVEGS 289

Query: 302 ASL-ARARVDLVQLVGTVAQEMWQDPQVNERLVLKVPDSAAPVALGDVDALAIALRNLVE 360
            S     + +  Q+     Q+         RL +    S APV +  V ++A ALRNL++
Sbjct: 290 LSFDDGVQCNAEQVARLAIQDAASSDSRRIRLHVSPGLSDAPVQMPAVLSIA-ALRNLLD 348

Query: 361 NALRYGGERVTVEVMAPCT-----LVVRDFGAGVGAEQLQTLRQRHVRHASDRAGYGLGL 415
           NALR+  +   VE+            VRD G G+ A+ +Q L QR  R+     G GLGL
Sbjct: 349 NALRHTPDDTEVELSLEMVGQRVRFQVRDHGPGIAADDIQHLTQRFWRNGQS-TGCGLGL 407

Query: 416 SIVGTIVEKHNARLELASPPPG 437
           +IV  IV++    L   + P G
Sbjct: 408 AIVQAIVQRCGCGLHFDTRPDG 429