Pairwise Alignments

Query, 631 a.a., no description from Variovorax sp. SCN45

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  192 bits (487), Expect = 3e-53
 Identities = 117/290 (40%), Positives = 167/290 (57%), Gaps = 10/290 (3%)

Query: 339 SVLVNGETGSGKEVFSRRLHAASRRAAGPFVAVDCASLPETLIESELFGYDEGAFTGARR 398
           S+ + GE+G+GKEV +  +HAAS+R   PF+A++CA++P+ LIESELFG+ +GAFTGA  
Sbjct: 155 SIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAAT 214

Query: 399 KGMAGRIREAHGGVLFLDEIAEIPLALQTRLLRVLEERVVTPLGGGQGVAVDFDLVCATH 458
           +   G    A GG LFLDE+ E+ L LQT+LLR ++      +G  +  +VD   VCAT+
Sbjct: 215 E-RQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATN 273

Query: 459 GDLPALVKAGRFRADLMYRVAGFTVALPPLSRRADRHTLIARL---FLESGGAAKHLRLE 515
            D    V+ GRFR DL YR+    + LPPL  R D    IA     F+        +RL 
Sbjct: 274 RDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLS 333

Query: 516 SDALEALAAYRWPGNVRELRSTLRAVVALADTGDSVTAAALPAHLLGTHAAPTTDAATEA 575
           ++ +E    Y WPGNVR+L++ LR VV L + G  +T   LP   L   +AP   A   A
Sbjct: 334 AEVVERFRQYEWPGNVRQLQNVLRNVVVL-NEGREITLDMLPPP-LNQMSAPINRALPLA 391

Query: 576 ----ALAPQAGPLQAITRHAIDEALKACDHDVSKAARRLGVHRSTVYRHI 621
                   +  PL    + AI++A++ACD ++ +AA  L V  ST+YR +
Sbjct: 392 HENKVSVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKL 441