Pairwise Alignments

Query, 774 a.a., ATPase, AAA family from Variovorax sp. SCN45

Subject, 444 a.a., AAA ATPase central domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 88.6 bits (218), Expect = 6e-22
 Identities = 66/179 (36%), Positives = 85/179 (47%), Gaps = 4/179 (2%)

Query: 569 FYGAPGTGKTALAEHIAKALGRPLLVKQASDLMSKYVGETEQNMAAMFREAENEKAVLLL 628
           F G  GTGKT  A  +A  LG PL       ++SKY+GETE+N+ A+F  A   + VL  
Sbjct: 220 FSGPSGTGKTFTASVLAAELGWPLYRVDLGMVVSKYIGETEKNLNALFDAAHGAEMVLQF 279

Query: 629 DEADSFLQDR---RGAQRTYEVTEVNEMLQGMERFNGVFVCTTNLLDRLDQAALRRFTFK 685
           DEADS L  R   + A+  Y   EV+ +L  +E+  G  + TTNL   LD A +RRF   
Sbjct: 280 DEADSLLGKRAEVKEARDRYANMEVSHLLSRIEQHRGPCILTTNLRTHLDPAFMRRFQAV 339

Query: 686 IKFMPLTAVQRERMFVTEALAGDAERITSAIRARLAQLTQLCPGDFAAVKRQTDILAAE 744
           I+F       RE ++     AG A        A LA    L  G           LAAE
Sbjct: 340 IEFPRPDLAAREALWARLLPAG-APIAAEVKLAELAAAVPLTGGGIQNAALHAAYLAAE 397



 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 64/227 (28%), Positives = 90/227 (39%), Gaps = 21/227 (9%)

Query: 311 GVNVLLYGPPGTGKTELAKVVAQAAGLELFEVEYADRDGNSLSGRDRYRSLQIAQVFLKG 370
           G   L  GP GTGKT  A V+A   G  L+ V+        +   ++  +   A      
Sbjct: 215 GPLALFSGPSGTGKTFTASVLAAELGWPLYRVDLGMVVSKYIGETEKNLN---ALFDAAH 271

Query: 371 SAQAALLFDEVEDVFPPISTEAAQFMARAEQIPAPTSGSVSGKAWVNQILEANPVPTLWV 430
            A+  L FDE + +   +   A    AR        S  +S        +E +  P +  
Sbjct: 272 GAEMVLQFDEADSL---LGKRAEVKEARDRYANMEVSHLLSR-------IEQHRGPCILT 321

Query: 431 TNRIEQIDPAFRRRFAYHLELKSPPPGAREQLVKKTLE--GVVVSEAFTAKLAERKGLTP 488
           TN    +DPAF RRF   +E   P   ARE L  + L     + +E   A+LA    LT 
Sbjct: 322 TNLRTHLDPAFMRRFQAVIEFPRPDLAAREALWARLLPAGAPIAAEVKLAELAAAVPLTG 381

Query: 489 AQIRTAVRFAG-LAKTDD-----ASVEALIERQLRNADLALGTLDTG 529
             I+ A   A  LA  DD     A +   I R+L  +  A G  + G
Sbjct: 382 GGIQNAALHAAYLAAEDDTEIGLAQIATAIWRELGKSGKATGHKELG 428