Pairwise Alignments

Query, 591 a.a., ATP-dependent DNA helicase RecQ from Variovorax sp. SCN45

Subject, 707 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas stutzeri RCH2

 Score =  606 bits (1563), Expect = e-178
 Identities = 320/590 (54%), Positives = 406/590 (68%), Gaps = 24/590 (4%)

Query: 1   VVGGGDALVLMPTGGGKSLCYQIPAIARQRAGHGVAIVVSPLIALMHDQVGALHEAGVSA 60
           V  GGDALVLMPTGGGKSLCYQ+PA+ R     G+A+VVSPLIALM DQV  L E GVSA
Sbjct: 29  VGSGGDALVLMPTGGGKSLCYQVPALLRD----GLAVVVSPLIALMDDQVATLDELGVSA 84

Query: 61  AFLNSTLDWEETQDVERRMLRGEITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEA 120
             LNSTL  +E +D+  R+ R EI +LY APER+  PR L+ L  L+    ++LFAIDEA
Sbjct: 85  VALNSTLSPDEQRDIAERIRRNEIKMLYLAPERLVQPRMLAFLQRLE----IALFAIDEA 140

Query: 121 HCVSQWGHDFRPEYRALTVLHERYAGVPRIALTATADDLTRADIVERLQLEEARQFVSSF 180
           HCVSQWGHDFRPEY  L  L E + GVPRIALTATAD  TR +IV+RL LE A +F+SSF
Sbjct: 141 HCVSQWGHDFRPEYMQLGQLSELFPGVPRIALTATADMRTREEIVQRLHLENAERFLSSF 200

Query: 181 DRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVTLRDAGINALPYH 240
           DRPNI Y IV K+    QLL F+  E  GDAG+VYC SRK+V+D A  L + G  ALPYH
Sbjct: 201 DRPNIFYRIVPKEQPRKQLLGFLA-ERRGDAGIVYCMSRKKVDDFAAFLTEQGFPALPYH 259

Query: 241 AGLDAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQETGRA 300
           AGL   +R  HQ RFL EEG++MVATIAFGMGIDKP+VRFV HLD+PK++E YYQETGRA
Sbjct: 260 AGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDLPKSLEAYYQETGRA 319

Query: 301 GRDGGPADAWMAYGLQDVVNQRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLL 360
           GRDG PADAWMAYGLQDV+  ++M++ S   E  K+V + KLDA+L+L E + CRR  LL
Sbjct: 320 GRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHKLDAMLALCEETRCRRQALL 379

Query: 361 GYFGEK-STPCGNCDNCLNPPQVWDGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGK 419
            YF E+  +PCG+CDNC++  Q WD T+ AR+ LS IYR    SG  +G GH++D+L G+
Sbjct: 380 AYFDEELPSPCGHCDNCVDGVQTWDATEPARQALSAIYR----SGQRYGVGHLVDVLLGR 435

Query: 420 ATEKVKQFGHERVSTFGIGAEFSEVALRGVLRQLIATGALAVDAEAFNTLKLTEGSRAVL 479
             +KV+  GH+ +S FG+G   +E   R + RQL+A G   VD + F  L+L++  R +L
Sbjct: 436 DNDKVRGLGHQHLSVFGVGKALAETEWRSLFRQLVARGLADVDLDGFGGLRLSDSCRPLL 495

Query: 480 RGEAQVTLRESVSSPAERSKSRREKTVKGAPSPAAAKLDDTGKKRFEALKAWRAEVAKEH 539
           RGE  + LR  +SS          K  K A S A+  +    ++ +EAL+  R ++A+EH
Sbjct: 496 RGEVSLELRRDLSS----------KAPKPAASAASQLVRSEERETWEALRTLRRKLAEEH 545

Query: 540 NLPAYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGSEVLRVCE 589
           ++P YVIF DATL  +    PA+L D+  ISG+G +KLE YG   L V +
Sbjct: 546 SVPPYVIFPDATLLEMLRSQPASLSDMAMISGVGARKLERYGQAFLEVLQ 595