Pairwise Alignments

Query, 591 a.a., ATP-dependent DNA helicase RecQ from Variovorax sp. SCN45

Subject, 636 a.a., ATP-dependent DNA helicase from Sinorhizobium meliloti 1021

 Score =  580 bits (1495), Expect = e-170
 Identities = 309/594 (52%), Positives = 394/594 (66%), Gaps = 23/594 (3%)

Query: 1   VVGGGDALVLMPTGGGKSLCYQIPAIARQRAGHGVAIVVSPLIALMHDQVGALHEAGVSA 60
           VV GGDA+VL PTG GKSLC+QIPA+ R+    GV IVVSPLIALM DQV AL + G+ A
Sbjct: 61  VVAGGDAVVLFPTGAGKSLCFQIPALCRR----GVGIVVSPLIALMRDQVEALKQLGIRA 116

Query: 61  AFLNSTLDWEETQDVERRMLRGEITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEA 120
           A LNS+L  +E   V R + R E+ LLY  PER  T  F   +        ++LFAIDEA
Sbjct: 117 AALNSSLTRDEAIAVRRALSRDELDLLYVTPERAVTDGFAEMIAD----ADIALFAIDEA 172

Query: 121 HCVSQWGHDFRPEYRALTVLHERYAGVPRIALTATADDLTRADIVERLQLEEARQFVSSF 180
           HCVSQWGHDFRPEYR L  L ER+ GVPRIALTATAD  TR D++ERL L  AR F SSF
Sbjct: 173 HCVSQWGHDFRPEYRGLGCLAERFPGVPRIALTATADPHTRDDMIERLGLGGARVFASSF 232

Query: 181 DRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVTLRDAGINALPYH 240
           DRPNI Y IVE+     QLLRF+ R  +  +G+VYC SR +VED A  L   GI ALPYH
Sbjct: 233 DRPNIAYEIVERDQPRQQLLRFLSRFKDA-SGIVYCLSRAKVEDTAEWLDAQGIRALPYH 291

Query: 241 AGLDAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQETGRA 300
           AG++ A R  HQD FL+EE + +VAT+AFGMGIDKPDVR+V HLD+P ++E YYQETGRA
Sbjct: 292 AGMERAARDAHQDAFLKEENLCLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRA 351

Query: 301 GRDGGPADAWMAYGLQDVVNQRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLL 360
           GRDG P++ WMAYG+ DV+ +RRMIDE  A EE K++ R KL++LL++ E + CRR  +L
Sbjct: 352 GRDGLPSEVWMAYGMADVIQRRRMIDEGGAPEEIKRIERAKLNSLLAICETAGCRRQAIL 411

Query: 361 GYFGEKST-PCGNCDNCLNPPQVWDGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGK 419
            +FGE     CG+CD CL P + WDGT+AA K L+ +YR    +G  FG GH++D+L G 
Sbjct: 412 AHFGEAHPGGCGHCDTCLKPVETWDGTEAAIKALAAVYR----TGERFGTGHLIDVLTGS 467

Query: 420 ATEKVKQFGHERVSTFGIGAEFSEVALRGVLRQLIATGALAVDAEAFNTLKLTEGSRAVL 479
             EK ++FGH  +  FG G +      + + RQL+A G ++VD  AF  LKL   +R+V 
Sbjct: 468 VNEKTERFGHVDMPVFGAGKDLPARTWQSIFRQLLAAGLISVDHAAFGALKLEPEARSVF 527

Query: 480 RGEAQVTLRESVSSPAERSKSRREKTVKGAPSPAAAKLDDTGK--KRFEALKAWRAEVAK 537
           R E QV  R+      +R  S + KT +G+  PA+ + D  G   + FE L++ R  +A+
Sbjct: 528 RRERQVLFRK------DRPSSGKAKTARGS-KPASERSDLAGSDLELFERLRSERLSLAR 580

Query: 538 EHNLPAYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGSEVLRVCEAF 591
           E ++P YV+F D TL A+A+R P   E+L  + GIG  K E YG   L V EAF
Sbjct: 581 EMDVPPYVVFPDTTLIALAKRRPRDFEELLDVPGIGESKRERYGEAFLAVIEAF 634