Pairwise Alignments

Query, 591 a.a., ATP-dependent DNA helicase RecQ from Variovorax sp. SCN45

Subject, 622 a.a., ATP-dependent DNA helicase RecQ from Marinobacter adhaerens HP15

 Score =  620 bits (1598), Expect = 0.0
 Identities = 321/584 (54%), Positives = 401/584 (68%), Gaps = 19/584 (3%)

Query: 4   GGDALVLMPTGGGKSLCYQIPAIARQRAGHGVAIVVSPLIALMHDQVGALHEAGVSAAFL 63
           G DALVLMPTGGGKSLCYQ+PA+ R     G AIV+SPLIALM DQV AL E GV AAFL
Sbjct: 49  GRDALVLMPTGGGKSLCYQVPALVRS----GTAIVISPLIALMQDQVAALKELGVRAAFL 104

Query: 64  NSTLDWEETQDVERRMLRGEITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEAHCV 123
           NST+D+E+ +  E  ++ GE+ LLY APER+  PR +  L        +SLFAIDEAHCV
Sbjct: 105 NSTMDFEQARATEYALMTGELDLLYCAPERLIQPRTIELLHD----ASISLFAIDEAHCV 160

Query: 124 SQWGHDFRPEYRALTVLHERYAGVPRIALTATADDLTRADIVERLQLEEARQFVSSFDRP 183
           SQWGHDFR +Y  L++L E++ GVPRIALTATAD+ TR +I ERL L EAR FVS FDRP
Sbjct: 161 SQWGHDFRSDYLQLSMLAEQFPGVPRIALTATADERTRKEIAERLSLTEARHFVSGFDRP 220

Query: 184 NIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVTLRDAGINALPYHAGL 243
           NI+Y I  K +A  QLL FI+ EHEGD G+VYC SR +V+  A TL   G  ALPYHAGL
Sbjct: 221 NIQYRIAPKINANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAKTLAQKGYTALPYHAGL 280

Query: 244 DAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQETGRAGRD 303
            +  R  HQ+RFLRE+G+++VATIAFGMGIDKPDVRFV HLD+PK++E YYQETGRAGRD
Sbjct: 281 SSEQRAHHQERFLREDGVIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRD 340

Query: 304 GGPADAWMAYGLQDVVNQRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLLGYF 363
           G P+ AWM YGLQDV+  R+M++ S   + FK+V R KLDA+L L E + CRR  LL YF
Sbjct: 341 GKPSTAWMVYGLQDVIKLRQMLESSQGNDHFKRVERQKLDAMLGLCEVTSCRRQVLLRYF 400

Query: 364 G-EKSTPCGNCDNCLNPPQVWDGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGKATE 422
           G E   PCGNCD CLNPP  WDGT A +K LS ++R    +G  FG  +++D+LRG   E
Sbjct: 401 GDELEQPCGNCDTCLNPPDTWDGTVAVQKALSCVFR----TGQRFGVTYLIDVLRGSENE 456

Query: 423 KVKQFGHERVSTFGIGAEFSEVALRGVLRQLIATGALAVDAEAFNTLKLTEGSRAVLRGE 482
           ++ Q GH +VST+GIG E S    + V RQL+A G L  D E +  L+LTE  R +L+G 
Sbjct: 457 RILQSGHHQVSTYGIGTELSANEWKSVYRQLVANGYLRADPEGYGALQLTEQCRPLLKGR 516

Query: 483 AQVTLRESVSSPAERSKSRREKTVKGAPSPAAAKLDDTGKKRFEALKAWRAEVAKEHNLP 542
             + LR+      E  K+        + SP + ++ D  K  +EAL+A R E+A +  +P
Sbjct: 517 QTIELRKD----PEIKKTTGRANGGRSGSPVSEQITD--KAGWEALRACRKELADKQGVP 570

Query: 543 AYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGSEVLR 586
            YVIFHD TL  + ER P TL++L  +SG+G  KLE YG   L+
Sbjct: 571 PYVIFHDTTLFGMLERKPRTLDELAEVSGVGAAKLEKYGEIFLQ 614