Pairwise Alignments

Query, 323 a.a., Histidine ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 59/273 (21%), Positives = 110/273 (40%), Gaps = 35/273 (12%)

Query: 20  AAGMAGTAAAQETKIALGMSGWTGFAPLSLADKAGIFKKNGLDVELKMIPQKDRHLALAS 79
           A  ++  A A   KIA+  +  +  +P  LAD+ G FK+ G+DVE          L   S
Sbjct: 31  ATAISVNANAAPIKIAVSQTPLS--SPFYLADQLGFFKQQGIDVE----------LVACS 78

Query: 80  GAIQCAATTVETHVAWNANGVPIVQIFQMDKS--------YGADG----LAVRGD-VSKF 126
           G +QC+    +  V++      +      ++           +D     LA+  + +   
Sbjct: 79  GGVQCSQALFQGAVSYATASESVAMFSSFERQDFLILASFVQSDNDLKLLALESETIRSV 138

Query: 127 SDLKGKTIGVDAPGTAPYFGLAWMLSKNGMTLKDVKTTTLSPQASAQAFVAGQNDAAMTY 186
           +DL  K +G+     + ++  + +L+ N   +   K    + Q   Q F   Q DA   +
Sbjct: 139 ADLHNKRVGMIRASASEFYFDSLLLANNLKGIPIDKVYGTADQLYQQLF-DKQLDAISIW 197

Query: 187 EPYLSTVRANPAAGKILATTLD--YPMVMDTVGCAPTWLKANAKAAAALTKSYFDALDMI 244
           EP+   +    A  K+   +L   Y +  + +   PT  +   + + A+ K+   A+D I
Sbjct: 198 EPWGYKIGV-AAESKVTNLSLPGIYTLSFNLLTMKPT-TEEEKQRSLAILKALKQAIDWI 255

Query: 245 KAEPEKSNELMGSAVKQSGEQFAKSSAFLRWQD 277
              PE++   +   +    +Q   S     WQD
Sbjct: 256 HQNPERTRYRVAGVLNIDEKQLRWS-----WQD 283