Pairwise Alignments

Query, 280 a.a., Histidine ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  132 bits (331), Expect = 1e-35
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 4/247 (1%)

Query: 35  RVLLGLAFFVVFVLVW---AIATLGGFVPPTFLASPPTMVKEGWLLFTEYGFIGDIGMTV 91
           ++L  L   ++ +L W   AI      + P   +    ++  G  +      I +  +++
Sbjct: 2   KILKNLTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSI 61

Query: 92  WRVFGGFLLAAVFAVPLGIAMGTWKTVEAFFEPFVSFCRYLPASAFIPLLILWAGLGEMQ 151
            RV  GF +A  FA+PLG+ MG +  +   F+  V   R +P  A++PL + W G+GE  
Sbjct: 62  KRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESS 121

Query: 152 KLLVIFIGSFFQIVLMVAVTVGGARRDLVEAAYTLGANSRGIVARVLIPGAAPGIAETLR 211
              +I IG+FF I++     V      ++EAA TLG +++ I+  V++P ++P I   LR
Sbjct: 122 MHFIILIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLR 181

Query: 212 LVLGWAWTYVIVAELI-GSSSGIGHMITDSQALLNTGQIIFGIIVIGVIGLLSDFAFKAL 270
           +  G AW  V+ AE++ GS +G+G++I  + +L     ++  +I+IG+IG++ D   + +
Sbjct: 182 VGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYI 241

Query: 271 NRRLFAW 277
            ++ F W
Sbjct: 242 EKKYFCW 248