Pairwise Alignments

Query, 519 a.a., Histidine ammonia-lyase (EC 4.3.1.3) from Variovorax sp. SCN45

Subject, 513 a.a., histidine ammonia-lyase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  536 bits (1380), Expect = e-157
 Identities = 295/507 (58%), Positives = 365/507 (71%), Gaps = 3/507 (0%)

Query: 13  LTLTPGKVDLAMLRHIQAGGVQLALDASVRDGMARAEAAVRHIVENDQVVYGINTGFGKL 72
           L LTPG + LA LR I    + L L     + +  +   V+ +++  + VYGINTGFG L
Sbjct: 7   LVLTPGSLSLAQLREISRHKLTLELAPEAINDINISAQIVQKVLDEGRTVYGINTGFGLL 66

Query: 73  ASTRIGNDHLAELQRNLVLSHSVGTGEPLTAPVVRMILATKAVSLARGHSGVRPALVDAL 132
           A+T+I  + L  LQR++VLSH+ GTG+ +    VR+++  K  SL+RG SG+R  +++ L
Sbjct: 67  ANTKIAPEDLQLLQRSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFL 126

Query: 133 LALFNAGVTPSIPCKGSVGASGDLAPLAHMACVLIGEGEATLADGKKVSGAEAMRSIGLE 192
           ++L NA V P +P KGSVGASGDLAPLAHM   L+GEGE +   G+ +S AE +   GL+
Sbjct: 127 ISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLGEGEMSY-QGQIISAAEGLEIAGLK 185

Query: 193 PFVLGPKEGLALLNGTQVSTALALAGLFGAEDVFASALMSGALSLEAIQGSIKPFDARIH 252
           P  L  KEGLALLNGTQ STALAL GLF AED+FA++ + GA+S+EA  GS  PFD RIH
Sbjct: 186 PIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVIGAMSVEAAMGSRSPFDPRIH 245

Query: 253 AARGQPGQIAVAGAVRTLL-EGSEIVPSHADCGRVQDPYSVRCIPQVMGACLDNLAHAAR 311
           AARGQ GQI  A   R LL E SEI  SHA+C +VQDPYS+RC PQV+GACL  +  AA 
Sbjct: 246 AARGQKGQIDSAMVFRYLLGEESEISLSHANCEKVQDPYSLRCQPQVLGACLTQIRQAAE 305

Query: 312 VLVIEANAASDNPLVFTDTGEVISGGNFHAEPVAFAADIIALAVSEVGAIAERRLALLLD 371
           VL  EAN  +DNPLVF DTG++ISGGNFHAEPVA AAD +A+A++E+GAIAERR+ALL+D
Sbjct: 306 VLATEANGVTDNPLVFQDTGDIISGGNFHAEPVAMAADNLAIAIAELGAIAERRIALLID 365

Query: 372 SGLSGLPPFLVRDGGLNSGFMIAQVTAAALASENKSLAHPASVDSLPTSANQEDHVSMAT 431
           S LS LPPFLV++GG+NSGFMIAQVTAAALASENK+ AHPASVDSLPTSANQEDHVSMAT
Sbjct: 366 SSLSKLPPFLVKNGGVNSGFMIAQVTAAALASENKTYAHPASVDSLPTSANQEDHVSMAT 425

Query: 432 FAARRLGDMVNNTAVVVGIEAMAAAQGIELKRKLKSSPLVEAEFAGIRQKVAFLETDRYL 491
           FAARRL DM  NT  V+ IE +AAAQG++ +  L  S  V    A +R+ VA+ + DRY 
Sbjct: 426 FAARRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSKAVAQAKAELREVVAYYDKDRYF 485

Query: 492 APDIEAMRLWALKAELPAAL-LDILPS 517
           APDIEA       A   A L L +LPS
Sbjct: 486 APDIEAATDLLYTASFNAYLPLGVLPS 512