Pairwise Alignments

Query, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (274), Expect = 3e-29
 Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 8/236 (3%)

Query: 16  AFFGLAGMAQAQGEPLRVATDATFPPMEFV-ENGKRTGFDVELVEAIGKTLGRKIEWIDI 74
           +  GL   + A  + ++   +AT+ P E++ EN +  GFDV+L  A+ K L  K  + + 
Sbjct: 8   SLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKCSFHNQ 67

Query: 75  DFKGLVPGLISKRFDMAVSGIYITDERKKVVDFTVPYYAGGLVVMVKDGNTAIKTPADIN 134
            F  L+P L  KR+D A+S + IT+ R + V+F+ PYY      +   G  A    A + 
Sbjct: 68  AFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGKVA--DQAALK 125

Query: 135 GKKVSVQVGTKSVSYTKEKFPQVQLMEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTR 194
           GK+V VQ G+   S+  E+   V  +     Q+ F  +  GR D+         ++ +  
Sbjct: 126 GKRVGVQNGSTHQSFLLEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGDTAVVAEWFKGD 185

Query: 195 GGLKVLPEQITTEEY-----GMAIRKDTPELTKAVNGAIEKLKADGTYDQIVKKWF 245
             L  + E++T  +Y     G+A+ KD   L   +N A+E +K +G Y  I  K+F
Sbjct: 186 NNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAIFNKYF 241