Pairwise Alignments

Query, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 258 a.a., amino acid uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  122 bits (307), Expect = 5e-33
 Identities = 79/258 (30%), Positives = 140/258 (54%), Gaps = 23/258 (8%)

Query: 4   RRTLVAAALSGFAFFGLAGMAQAQGEPLRVATDATFPPMEFVEN-GKRTGFDVELVEAIG 62
           R+ ++A AL+G A    A  A    E L++ T+  +PP  FV++ GK  GFDVE+  A+ 
Sbjct: 2   RKLILALALAGTALSSSAVAA----EKLKIGTEGAYPPFNFVDSSGKIGGFDVEIGLALC 57

Query: 63  KTLGRKIEWIDIDFKGLVPGLISKRFDMAVSGIYITDERKKVVDFTVPYYAGGLV-VMVK 121
           + +  + E +  D+ G++PGL++K++DM ++ ++IT+ERKK V FT PYY   +     K
Sbjct: 58  ERMKVECEVVAQDWDGIIPGLLAKKYDMIIASMFITEERKKQVAFTNPYYLAAMTHAAPK 117

Query: 122 DGNTAIKTPADINGKKVSVQVGTKSVSYTKEKFPQVQL----MEVEKNQEMFNLVDIGRA 177
               +  +   + GK +  Q GT    Y    +P  ++     + E N +M N    GR 
Sbjct: 118 GAGISAFSNEALQGKVIGAQSGTTQADYIAAVYPDAEIKLYPTQDEANLDMVN----GRL 173

Query: 178 DAAVTGKPAAYQYVRT----RGGLKVLPEQITTEEY-----GMAIRKDTPELTKAVNGAI 228
           D  V        +V      +G  +++ E IT +++     G+A+R++  E+ + +N A+
Sbjct: 174 DLQVGDMLPLLDWVTKNDDGKGCCELVGEPITDKKFVGDGVGIAVRQEDNEMREKLNKAL 233

Query: 229 EKLKADGTYDQIVKKWFS 246
           ++++ADGTY +I  K+F+
Sbjct: 234 DEIRADGTYKKINDKYFT 251